RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 ABHD2P08910 425 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 WEE2P0C1S8 567 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 RARAP10276 462 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 GHRP10912 638 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 IVDP26440 423 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 ATP5DP30049 168 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 CCT5P48643 541 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 SLC26A2P50443 739 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 SLC18A1P54219 525 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 PRKCEQ02156 737 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 MAP2K1Q02750 393 aaPredicted RBP9.03□□□□□ -0.96
CHD2-209ENST00000627185 PDCLQ13371 301 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 CDCA2Q69YH5 1023 aaPredicted RBP9.03□□□□□ -0.96
CHD2-209ENST00000627185 FOXR1Q6PIV2 292 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 POTEAQ6S8J7 498 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 RIOX2Q8IUF8 465 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 ABRAQ8N0Z2 381 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 CPXCR1Q8N123 301 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 NIPA2Q8N8Q9 360 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 ATL2Q8NHH9 583 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 EXD1Q8NHP7 514 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 FBXO25Q8TCJ0 367 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 IPO4Q8TEX9 1081 aaKnown RBP9.03□□□□□ -0.96
CHD2-209ENST00000627185 ZNF473Q8WTR7 871 aaKnown RBP9.03□□□□□ -0.96
CHD2-209ENST00000627185 KRT35Q92764 455 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 ZNF653Q96CK0 615 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 CGRRF1Q99675 332 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 NFKBIZQ9BYH8 718 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 ACTR5Q9H9F9 607 aaPredicted RBP9.03□□□□□ -0.96
CHD2-209ENST00000627185 POLD4Q9HCU8 107 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 ERVK-5Q9HDB9 667 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 GPRC5CQ9NQ84 441 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 A1CFQ9NQ94 594 aaKnown RBP9.03□□□□□ -0.96
CHD2-209ENST00000627185 NRBP2Q9NSY0 501 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 CNOT8Q9UFF9 292 aaKnown RBP9.03□□□□□ -0.96
CHD2-209ENST00000627185 HACL1Q9UJ83 578 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 AFG3L2Q9Y4W6 797 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 RIPK3Q9Y572 518 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 CNTNAP2Q9UHC6 1331 aa9.03□□□□□ -0.96
CHD2-209ENST00000627185 BRCA1P38398 1863 aaKnown RBP9.02□□□□□ -0.96
CHD2-209ENST00000627185 TP73O15350 636 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 RIPK2O43353 540 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 SPOPO43791 374 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 MAFO75444 373 aaPredicted RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 GAS8O95995 478 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 MYCLP12524 364 aaPredicted RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 BMP2P12643 396 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 FLT3P36888 993 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 CTSOP43234 321 aaPredicted RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 RPL21P46778 160 aaKnown RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 RNASE9P60153 205 aaKnown RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 PSMA6P60900 246 aaKnown RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 NOMO3P69849 1222 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 MRPS25P82663 173 aaKnown RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 STRN3Q13033 797 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 CUL2Q13617 745 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 NEDD9Q14511 834 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 TMEM132BQ14DG7 1078 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 EMC2Q15006 297 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 CCDC142Q17RM4 750 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 KRT71Q3SY84 523 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 ZC3H12AQ5D1E8 599 aaKnown RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 LIN9Q5TKA1 542 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 IER5Q5VY09 327 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 DENND2CQ68D51 928 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 SNRNP48Q6IEG0 339 aaKnown RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 SWSAP1Q6NVH7 229 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 TTC27Q6P3X3 843 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 CRELD2Q6UXH1 353 aaPredicted RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 NSMFQ6X4W1 530 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 TAOK1Q7L7X3 1001 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 TRIM46Q7Z4K8 759 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 POLNQ7Z5Q5 900 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 DDX42Q86XP3 938 aaKnown RBP eCLIP9.02□□□□□ -0.97
CHD2-209ENST00000627185 WDR49Q8IV35 697 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 CCDC60Q8IWA6 550 aaPredicted RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 BRSK2Q8IWQ3 736 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 SUGP1Q8IWZ8 645 aaKnown RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 RHOT1Q8IXI2 618 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 CNPY4Q8N129 248 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 RIBC1Q8N443 379 aaPredicted RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 SH2D3CQ8N5H7 860 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 CCDC89Q8N998 374 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 FNIP1Q8TF40 1166 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 UBLCP1Q8WVY7 318 aaPredicted RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 KAT5Q92993 513 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 COL26A1Q96A83 441 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 ZNF317Q96PQ6 595 aaPredicted RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 FNBP1Q96RU3 617 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 JPH2Q9BR39 696 aaPredicted RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 CELF4Q9BZC1 486 aaKnown RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 FETUBQ9UGM5 382 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 LGALS13Q9UHV8 139 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 AGO2Q9UKV8 859 aaKnown RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 DRG1Q9Y295 367 aaKnown RBP9.02□□□□□ -0.97
CHD2-209ENST00000627185 IVNS1ABPQ9Y6Y0 642 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 SIP14410 1827 aa9.02□□□□□ -0.97
CHD2-209ENST00000627185 A0A0G2JMZ2 1700 aa9.01□□□□□ -0.97
CHD2-209ENST00000627185 TCRBV5S1A1TA0A578 114 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms