RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 ARID4AP29374 1257 aaPredicted RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CSNK1EP49674 416 aaKnown RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 KRTAP10-9P60411 292 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 MRPS21P82921 87 aaKnown RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SP2Q02086 613 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CALD1Q05682 793 aaKnown RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 USP4Q13107 963 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ARID5BQ14865 1188 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 TEAD2Q15562 447 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 TGIF1Q15583 401 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ZRSR2Q15696 482 aaKnown RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PSMD5Q16401 504 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 GNPTABQ3T906 1256 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 HS1BP3Q53T59 392 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PPP4R3BQ5MIZ7 849 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 HMBOX1Q6NT76 420 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CC2D1AQ6P1N0 951 aaPredicted RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 FUT10Q6P4F1 479 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PRSS55Q6UWB4 352 aaPredicted RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 C16orf86Q6ZW13 317 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ADAT2Q7Z6V5 191 aaKnown RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CEP57Q86XR8 500 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 GATAD2AQ86YP4 633 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 JAMLQ86YT9 394 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ZNF444Q8N0Y2 327 aaPredicted RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CLASRPQ8N2M8 674 aaKnown RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ENAHQ8N8S7 591 aaPredicted RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 TXNDC5Q8NBS9 432 aaKnown RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 NEDD1Q8NHV4 660 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SYTL5Q8TDW5 730 aaPredicted RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 EPS8L1Q8TE68 723 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 HTR3CQ8WXA8 447 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 DNASE2BQ8WZ79 361 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 LPPQ93052 612 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 GRAMD1AQ96CP6 724 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 RSPRY1Q96DX4 576 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CHFRQ96EP1 664 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 GMCL1Q96IK5 515 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 KCNK17Q96T54 332 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SMR3AQ99954 134 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 MAF1Q9H063 256 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 RANBP17Q9H2T7 1088 aaKnown RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SMARCAD1Q9H4L7 1026 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 DCP1AQ9NPI6 582 aaPredicted RBP3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 COPG2Q9UBF2 871 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CYP8B1Q9UNU6 501 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 NFE2L3Q9Y4A8 694 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 MAP4K5Q9Y4K4 846 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PCDHGA8Q9Y5G5 932 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SNX11Q9Y5W9 270 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PCDH15Q96QU1 1955 aa3.43□□□□□ -1.86
SCARNA15.3-201ENST00000626315 LOXHD1Q8IVV2 1947 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PRRC2AP48634 2157 aaKnown RBP3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 KNL1Q8NG31 2342 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CDRT15L2A8MXV6 281 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 H0Y8X5 98 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CNTN5O94779 1100 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 KLF8O95600 359 aaPredicted RBP3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 POMCP01189 267 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 INHBBP09529 407 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 LIPCP11150 499 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 NCAM1P13591 858 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 RARGP13631 454 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 OR1D2P34982 312 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 TCF7P36402 384 aaPredicted RBP3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 GRM5P41594 1212 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 AFF3P51826 1226 aaKnown RBP3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 DAB2P98082 770 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 BNC1Q01954 994 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 NR1H3Q13133 447 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SRSF6Q13247 344 aaKnown RBP3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 RAB33AQ14088 237 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PLCB4Q15147 1175 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CCDC96Q2M329 555 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 HSF5Q4G112 596 aaPredicted RBP3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CCDC158Q5M9N0 1113 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 GPR158Q5T848 1215 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 TWF2Q6IBS0 349 aaKnown RBP3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PODNL1Q6PEZ8 512 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 TMED8Q6PL24 325 aaPredicted RBP3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ADGRD1Q6QNK2 874 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 MTHFD1LQ6UB35 978 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CLEC14AQ86T13 490 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 VASH2Q86V25 355 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 XYLT1Q86Y38 959 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ZNF276Q8N554 614 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 UBR7Q8N806 425 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 WDR36Q8NI36 951 aaKnown RBP3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SDR42E1Q8WUS8 393 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SEPT1Q8WYJ6 367 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PRR11Q96HE9 360 aaPredicted RBP3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 C18orf12Q96KH6 178 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 FOXC2Q99958 501 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PLA2G12AQ9BZM1 189 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 BTBD1Q9H0C5 482 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CDT1Q9H211 546 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 EBF3Q9H4W6 596 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 AZI2Q9H6S1 392 aa3.42□□□□□ -1.86
SCARNA15.3-201ENST00000626315 DLL4Q9NR61 685 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms