RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 WDR72Q3MJ13 1102 aa20.9■□□□□ 0.94
TREX1-205ENST00000625293 PHLDB2Q86SQ0 1253 aa20.9■□□□□ 0.94
TREX1-205ENST00000625293 WDTC1Q8N5D0 677 aa20.9■□□□□ 0.94
TREX1-205ENST00000625293 CCDC26Q8TAB7 109 aa20.9■□□□□ 0.94
TREX1-205ENST00000625293 WHAMMQ8TF30 809 aa20.9■□□□□ 0.94
TREX1-205ENST00000625293 ACBD3Q9H3P7 528 aa20.9■□□□□ 0.94
TREX1-205ENST00000625293 MRPL47Q9HD33 250 aaKnown RBP20.9■□□□□ 0.94
TREX1-205ENST00000625293 ITGA11Q9UKX5 1188 aa20.9■□□□□ 0.94
TREX1-205ENST00000625293 NFU1Q9UMS0 254 aa20.9■□□□□ 0.94
TREX1-205ENST00000625293 SCINQ9Y6U3 715 aa20.9■□□□□ 0.94
TREX1-205ENST00000625293 MYO1FO00160 1098 aa20.89■□□□□ 0.93
TREX1-205ENST00000625293 PAEPP09466 180 aa20.89■□□□□ 0.93
TREX1-205ENST00000625293 EIF4BP23588 611 aaKnown RBP20.89■□□□□ 0.93
TREX1-205ENST00000625293 ECHS1P30084 290 aa20.89■□□□□ 0.93
TREX1-205ENST00000625293 RAP1GAPP47736 663 aa20.89■□□□□ 0.93
TREX1-205ENST00000625293 SEL1L2Q5TEA6 688 aa20.89■□□□□ 0.93
TREX1-205ENST00000625293 MAATS1Q7Z4T9 603 aa20.89■□□□□ 0.93
TREX1-205ENST00000625293 SLAIN1Q8ND83 568 aa20.89■□□□□ 0.93
TREX1-205ENST00000625293 C1orf131Q8NDD1 294 aaKnown RBP20.89■□□□□ 0.93
TREX1-205ENST00000625293 PXYLP1Q8TE99 480 aa20.89■□□□□ 0.93
TREX1-205ENST00000625293 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.89■□□□□ 0.93
TREX1-205ENST00000625293 OSMRQ99650 979 aa20.89■□□□□ 0.93
TREX1-205ENST00000625293 AP5M1Q9H0R1 490 aa20.89■□□□□ 0.93
TREX1-205ENST00000625293 SMYD3Q9H7B4 428 aa20.89■□□□□ 0.93
TREX1-205ENST00000625293 CYP3A43Q9HB55 503 aa20.89■□□□□ 0.93
TREX1-205ENST00000625293 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.89■□□□□ 0.93
TREX1-205ENST00000625293 GOLGA6L10A0A0M3HER8 536 aa20.88■□□□□ 0.93
TREX1-205ENST00000625293 NPTXRO95502 500 aa20.88■□□□□ 0.93
TREX1-205ENST00000625293 POLR2BP30876 1174 aaKnown RBP20.88■□□□□ 0.93
TREX1-205ENST00000625293 RAD23BP54727 409 aa20.88■□□□□ 0.93
TREX1-205ENST00000625293 BEX3Q00994 111 aa20.88■□□□□ 0.93
TREX1-205ENST00000625293 GPS2Q13227 327 aa20.88■□□□□ 0.93
TREX1-205ENST00000625293 SLC27A1Q6PCB7 646 aa20.88■□□□□ 0.93
TREX1-205ENST00000625293 SLC13A5Q86YT5 568 aaPredicted RBP20.88■□□□□ 0.93
TREX1-205ENST00000625293 PRELID2Q8N945 189 aa20.88■□□□□ 0.93
TREX1-205ENST00000625293 TMEM35BQ8NCS4 154 aa20.88■□□□□ 0.93
TREX1-205ENST00000625293 UNC93B1Q9H1C4 597 aa20.88■□□□□ 0.93
TREX1-205ENST00000625293 PLEKHA5Q9HAU0 1116 aa20.88■□□□□ 0.93
TREX1-205ENST00000625293 KIAA0100Q14667 2235 aaKnown RBP20.88■□□□□ 0.93
TREX1-205ENST00000625293 TTI1O43156 1089 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 CILPO75339 1184 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 CALB1P05937 261 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 MYL3P08590 195 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 GUCY2FP51841 1108 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 CDH8P55286 799 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 CUL1Q13616 776 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 SIX1Q15475 284 aaPredicted RBP20.87■□□□□ 0.93
TREX1-205ENST00000625293 CYP1B1Q16678 543 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 CATSPER4Q7RTX7 472 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 IFT81Q8WYA0 676 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 PARVAQ9NVD7 372 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 DPP3Q9NY33 737 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 DERAQ9Y315 318 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 TREHO43280 583 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 PHF2O75151 1096 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 FAM153BP0C7A2 387 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 MAN1A1P33908 653 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 FAM153CQ494X1 144 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 APBB1IPQ7Z5R6 666 aaPredicted RBP20.87■□□□□ 0.93
TREX1-205ENST00000625293 MREGQ8N565 214 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 TRPV1Q8NER1 839 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 FEZF2Q8TBJ5 459 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 DNAJB3Q8WWF6 145 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 DDX27Q96GQ7 796 aaKnown RBP20.87■□□□□ 0.93
TREX1-205ENST00000625293 HPDLQ96IR7 371 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 SNX27Q96L92 541 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 TWNKQ96RR1 684 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 KATNAL1Q9BW62 490 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 EIF2AQ9BY44 585 aaKnown RBP20.87■□□□□ 0.93
TREX1-205ENST00000625293 CELF4Q9BZC1 486 aaKnown RBP20.87■□□□□ 0.93
TREX1-205ENST00000625293 LHX5Q9H2C1 402 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 FAM124BQ9H5Z6 455 aaPredicted RBP20.87■□□□□ 0.93
TREX1-205ENST00000625293 FAM153AQ9UHL3 310 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 AGAP1Q9UPQ3 857 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 GINS2Q9Y248 185 aa20.87■□□□□ 0.93
TREX1-205ENST00000625293 KAT6AQ92794 2004 aa20.86■□□□□ 0.93
TREX1-205ENST00000625293 AGPSO00116 658 aa20.86■□□□□ 0.93
TREX1-205ENST00000625293 CCL5P13501 91 aa20.86■□□□□ 0.93
TREX1-205ENST00000625293 RBP5P82980 135 aa20.86■□□□□ 0.93
TREX1-205ENST00000625293 ZNF200P98182 395 aaPredicted RBP20.86■□□□□ 0.93
TREX1-205ENST00000625293 PURAQ00577 322 aaKnown RBP20.86■□□□□ 0.93
TREX1-205ENST00000625293 FSCN1Q16658 493 aaKnown RBP20.86■□□□□ 0.93
TREX1-205ENST00000625293 DENND1BQ6P3S1 775 aa20.86■□□□□ 0.93
TREX1-205ENST00000625293 NOTUMQ6P988 496 aa20.86■□□□□ 0.93
TREX1-205ENST00000625293 ADAT2Q7Z6V5 191 aaKnown RBP20.86■□□□□ 0.93
TREX1-205ENST00000625293 SLC4A11Q8NBS3 891 aa20.86■□□□□ 0.93
TREX1-205ENST00000625293 TSEN2Q8NCE0 465 aaKnown RBP20.86■□□□□ 0.93
TREX1-205ENST00000625293 ELOVL4Q9GZR5 314 aa20.86■□□□□ 0.93
TREX1-205ENST00000625293 CXCL16Q9H2A7 254 aa20.86■□□□□ 0.93
TREX1-205ENST00000625293 MED4Q9NPJ6 270 aa20.86■□□□□ 0.93
TREX1-205ENST00000625293 SNTG2Q9NY99 539 aa20.86■□□□□ 0.93
TREX1-205ENST00000625293 TMEM191CA6NGB0 347 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 TLR3O15455 904 aaKnown RBP20.85■□□□□ 0.93
TREX1-205ENST00000625293 SYF2O95926 243 aaKnown RBP20.85■□□□□ 0.93
TREX1-205ENST00000625293 AKR1A1P14550 325 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 AXLP30530 894 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 INCA1Q0VD86 236 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 DHX34Q14147 1143 aaKnown RBP20.85■□□□□ 0.93
TREX1-205ENST00000625293 ZBTB6Q15916 424 aa20.85■□□□□ 0.93
TREX1-205ENST00000625293 PPP1R15BQ5SWA1 713 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms