RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 DSTYKQ6XUX3 929 aa12□□□□□ -0.49
DDX41-218ENST00000625286 TMEM150AQ86TG1 271 aa12□□□□□ -0.49
DDX41-218ENST00000625286 RIN3Q8TB24 985 aa12□□□□□ -0.49
DDX41-218ENST00000625286 REEP2Q9BRK0 252 aa12□□□□□ -0.49
DDX41-218ENST00000625286 SLC46A2Q9BY10 475 aa12□□□□□ -0.49
DDX41-218ENST00000625286 ATXN3LQ9H3M9 355 aa12□□□□□ -0.49
DDX41-218ENST00000625286 SEMA4GQ9NTN9 838 aa12□□□□□ -0.49
DDX41-218ENST00000625286 BLOC1S4Q9NUP1 217 aa12□□□□□ -0.49
DDX41-218ENST00000625286 CPSF3Q9UKF6 684 aaKnown RBP12□□□□□ -0.49
DDX41-218ENST00000625286 TBX20Q9UMR3 447 aa12□□□□□ -0.49
DDX41-218ENST00000625286 UBQLN1Q9UMX0 589 aaKnown RBP12□□□□□ -0.49
DDX41-218ENST00000625286 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.99□□□□□ -0.49
DDX41-218ENST00000625286 ANO9A1A5B4 782 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 VWA3AA6NCI4 1184 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 ANKRD63C9JTQ0 380 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 SLC30A4O14863 429 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 EXTL3O43909 919 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 PIGRP01833 764 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 ADRB1P08588 477 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 SDHBP21912 280 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 GABRR2P28476 465 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 MATR3P43243 847 aaKnown RBP eCLIP11.99□□□□□ -0.49
DDX41-218ENST00000625286 KPNA1P52294 538 aaPredicted RBP11.99□□□□□ -0.49
DDX41-218ENST00000625286 GRIN1Q05586 938 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 GPR158Q5T848 1215 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 C9orf57Q5W0N0 161 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 FAM160A2Q8N612 972 aaPredicted RBP11.99□□□□□ -0.49
DDX41-218ENST00000625286 CSGALNACT1Q8TDX6 532 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 E2F7Q96AV8 911 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 C8orf33Q9H7E9 229 aaPredicted RBP11.99□□□□□ -0.49
DDX41-218ENST00000625286 FBRSL1Q9HCM7 1045 aaKnown RBP11.99□□□□□ -0.49
DDX41-218ENST00000625286 SH2B1Q9NRF2 756 aaPredicted RBP11.99□□□□□ -0.49
DDX41-218ENST00000625286 RXFP3Q9NSD7 469 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 PPP4R2Q9NY27 417 aa11.99□□□□□ -0.49
DDX41-218ENST00000625286 OGTO15294 1046 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 CYP11A1P05108 521 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 WEE1P30291 646 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 HOXA6P31267 233 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 ALDH1A3P47895 512 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 PXNP49023 591 aaPredicted RBP11.98□□□□□ -0.49
DDX41-218ENST00000625286 ZNF131P52739 623 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 WNT7BP56706 349 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 PPP2R3AQ06190 1150 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 CSRP2Q16527 193 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 SLC39A12Q504Y0 691 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 ZC2HC1CQ53FD0 456 aaPredicted RBP11.98□□□□□ -0.49
DDX41-218ENST00000625286 PPM1JQ5JR12 505 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 NAIF1Q69YI7 327 aaPredicted RBP11.98□□□□□ -0.49
DDX41-218ENST00000625286 PRR23CQ6ZRP0 262 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 USP37Q86T82 979 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 LONP2Q86WA8 852 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 RALGPS2Q86X27 583 aaPredicted RBP11.98□□□□□ -0.49
DDX41-218ENST00000625286 YAF2Q8IY57 180 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 STKLD1Q8NE28 680 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 GIPC2Q8TF65 315 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 OXCT2Q9BYC2 517 aaPredicted RBP11.98□□□□□ -0.49
DDX41-218ENST00000625286 ZCWPW1Q9H0M4 648 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 RPF1Q9H9Y2 349 aaKnown RBP11.98□□□□□ -0.49
DDX41-218ENST00000625286 HPS4Q9NQG7 708 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 TMLHEQ9NVH6 421 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 KCND2Q9NZV8 630 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 RAB23Q9ULC3 237 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 CCL26Q9Y258 94 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 ASB3Q9Y575 518 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 GREB1Q4ZG55 1949 aa11.98□□□□□ -0.49
DDX41-218ENST00000625286 OBSL1O75147 1896 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 TM4SF5O14894 197 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 LRP3O75074 770 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 CD2BP2O95400 341 aaKnown RBP11.97□□□□□ -0.49
DDX41-218ENST00000625286 HMGA1P17096 107 aaKnown RBP11.97□□□□□ -0.49
DDX41-218ENST00000625286 NMT1P30419 496 aaKnown RBP11.97□□□□□ -0.49
DDX41-218ENST00000625286 GPR15P49685 360 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 ACOT2P49753 483 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 LIG4P49917 911 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 PLD1Q13393 1074 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 LRRC32Q14392 662 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 DHX8Q14562 1220 aaKnown RBP11.97□□□□□ -0.49
DDX41-218ENST00000625286 MCM6Q14566 821 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 PPP2R5DQ14738 602 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 CCDC6Q16204 474 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 ARHGAP29Q52LW3 1261 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 RILPL1Q5EBL4 403 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 DGKKQ5KSL6 1271 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 TRIM68Q6AZZ1 485 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 MCTP1Q6DN14 999 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 FSTL4Q6MZW2 842 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 CRELD2Q6UXH1 353 aaPredicted RBP11.97□□□□□ -0.49
DDX41-218ENST00000625286 WDR5BQ86VZ2 330 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 GPBP1Q86WP2 473 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 MYCT1Q8N699 235 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 ZSWIM2Q8NEG5 633 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 NETO1Q8TDF5 533 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 BICD1Q96G01 975 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 SEPT5Q99719 369 aaPredicted RBP11.97□□□□□ -0.49
DDX41-218ENST00000625286 FAM83CQ9BQN1 747 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 TASP1Q9H6P5 420 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 GKN1Q9NS71 199 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 OBP2AQ9NY56 170 aa11.97□□□□□ -0.49
DDX41-218ENST00000625286 LARSQ9P2J5 1176 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms