RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 MEI4A8MW99 385 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 TMCC1O94876 653 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 GAP43P17677 238 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 BGNP21810 368 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 GRIA2P42262 883 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 ARSEP51690 589 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 DYNLT1P63172 113 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 SPIRE1Q08AE8 756 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 ZNF543Q08ER8 600 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 TTLL12Q14166 644 aaPredicted RBP15.98■□□□□ 0.15
PMS1-221ENST00000624204 LPCAT4Q643R3 524 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 STKLD1Q8NE28 680 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 OR6Y1Q8NGX8 325 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 IWS1Q96ST2 819 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 RANBP17Q9H2T7 1088 aaKnown RBP15.98■□□□□ 0.15
PMS1-221ENST00000624204 IL1RAPL1Q9NZN1 696 aa15.98■□□□□ 0.15
PMS1-221ENST00000624204 SRP68Q9UHB9 627 aaKnown RBP15.98■□□□□ 0.15
PMS1-221ENST00000624204 MTA2O94776 668 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 AKR1B1P15121 316 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 SSTR1P30872 391 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 EPHB1P54762 984 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 SKA1Q96BD8 255 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 ERLEC1Q96DZ1 483 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 PHACTR1Q9C0D0 580 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 SUDS3Q9H7L9 328 aaPredicted RBP15.97■□□□□ 0.15
PMS1-221ENST00000624204 KAT6AQ92794 2004 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 ATP2A1O14983 1001 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 LDHCP07864 332 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 FAM163BP0C2L3 166 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 ULK2Q8IYT8 1036 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 DHX38Q92620 1227 aaKnown RBP15.97■□□□□ 0.15
PMS1-221ENST00000624204 CLMNQ96JQ2 1002 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 FAM111AQ96PZ2 611 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 NOCTQ9UK39 431 aaKnown RBP15.97■□□□□ 0.15
PMS1-221ENST00000624204 KIF13BQ9NQT8 1826 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 ADAMTSL3P82987 1691 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 EML1O00423 815 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 PABPC4LP0CB38 370 aaKnown RBP15.97■□□□□ 0.15
PMS1-221ENST00000624204 KRT10P13645 584 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 ATP6V1B1P15313 513 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 ASPHQ12797 758 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 MMEL1Q495T6 779 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 PPP1R18Q6NYC8 613 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 TMPRSS6Q8IU80 811 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 TRIM42Q8IWZ5 723 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 ZSWIM2Q8NEG5 633 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 WDR66Q8TBY9 1149 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 SLC7A8Q9UHI5 535 aa15.97■□□□□ 0.15
PMS1-221ENST00000624204 COL22A1Q8NFW1 1626 aaPredicted RBP15.97■□□□□ 0.15
PMS1-221ENST00000624204 EIF3DO15371 548 aaKnown RBP eCLIP15.96■□□□□ 0.15
PMS1-221ENST00000624204 RFX1P22670 979 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 VAMP7P51809 220 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 SH3BGRP55822 239 aaPredicted RBP15.96■□□□□ 0.15
PMS1-221ENST00000624204 TFDP1Q14186 410 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 TRMT5Q32P41 509 aaKnown RBP15.96■□□□□ 0.15
PMS1-221ENST00000624204 ACAD11Q709F0 780 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 ETNPPLQ8TBG4 499 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 SLC26A7Q8TE54 656 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 CYP4F11Q9HBI6 524 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 FAM86B1E9PN63 330 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 FAM86B2P0C5J1 330 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 CRABP2P29373 138 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 STXBP4Q6ZWJ1 553 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 TREML1Q86YW5 311 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 GSTCDQ8NEC7 633 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 STK32BQ9NY57 414 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 PCDHGA4Q9Y5G9 962 aa15.96■□□□□ 0.15
PMS1-221ENST00000624204 COL5A2P05997 1499 aaPredicted RBP15.96■□□□□ 0.15
PMS1-221ENST00000624204 ZNF862O60290 1169 aa15.96■□□□□ 0.14
PMS1-221ENST00000624204 LPXNO60711 386 aa15.96■□□□□ 0.14
PMS1-221ENST00000624204 CYP11B1P15538 503 aa15.96■□□□□ 0.14
PMS1-221ENST00000624204 MXI1P50539 228 aa15.96■□□□□ 0.14
PMS1-221ENST00000624204 SLC18A1P54219 525 aa15.96■□□□□ 0.14
PMS1-221ENST00000624204 GEMIN4P57678 1058 aaKnown RBP15.96■□□□□ 0.14
PMS1-221ENST00000624204 CCNG2Q16589 344 aa15.96■□□□□ 0.14
PMS1-221ENST00000624204 DPY19L2Q6NUT2 758 aa15.96■□□□□ 0.14
PMS1-221ENST00000624204 ZNF720Q7Z2F6 126 aa15.96■□□□□ 0.14
PMS1-221ENST00000624204 TDRPQ86YL5 185 aa15.96■□□□□ 0.14
PMS1-221ENST00000624204 RILPQ96NA2 401 aa15.96■□□□□ 0.14
PMS1-221ENST00000624204 KCNK13Q9HB14 408 aa15.96■□□□□ 0.14
PMS1-221ENST00000624204 ZNF652Q9Y2D9 606 aa15.96■□□□□ 0.14
PMS1-221ENST00000624204 ZNF711Q9Y462 761 aa15.96■□□□□ 0.14
PMS1-221ENST00000624204 SPECC1L-ADORA2AF8WAN1 911 aa15.95■□□□□ 0.14
PMS1-221ENST00000624204 HIRAP54198 1017 aaPredicted RBP15.95■□□□□ 0.14
PMS1-221ENST00000624204 ALDH18A1P54886 795 aaKnown RBP15.95■□□□□ 0.14
PMS1-221ENST00000624204 CENPCQ03188 943 aa15.95■□□□□ 0.14
PMS1-221ENST00000624204 DLG1Q12959 904 aa15.95■□□□□ 0.14
PMS1-221ENST00000624204 QRICH1Q2TAL8 776 aa15.95■□□□□ 0.14
PMS1-221ENST00000624204 SFT2D3Q587I9 215 aa15.95■□□□□ 0.14
PMS1-221ENST00000624204 CENPUQ71F23 418 aa15.95■□□□□ 0.14
PMS1-221ENST00000624204 MAP7D3Q8IWC1 876 aa15.95■□□□□ 0.14
PMS1-221ENST00000624204 SHKBP1Q8TBC3 707 aa15.95■□□□□ 0.14
PMS1-221ENST00000624204 CPA5Q8WXQ8 436 aa15.95■□□□□ 0.14
PMS1-221ENST00000624204 DNPEPQ9ULA0 475 aa15.95■□□□□ 0.14
PMS1-221ENST00000624204 ATF5Q9Y2D1 282 aaPredicted RBP15.95■□□□□ 0.14
PMS1-221ENST00000624204 FDX1P10109 184 aa15.95■□□□□ 0.14
PMS1-221ENST00000624204 AQP4P55087 323 aa15.95■□□□□ 0.14
PMS1-221ENST00000624204 SF3B3Q15393 1217 aaKnown RBP15.95■□□□□ 0.14
PMS1-221ENST00000624204 GRAMD1BQ3KR37 738 aa15.95■□□□□ 0.14
PMS1-221ENST00000624204 NET1Q7Z628 596 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms