RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 TOP6BLQ8N6T0 577 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 OR10T2Q8NGX3 314 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 CXorf38Q8TB03 319 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 GBP4Q96PP9 640 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 TMEM209Q96SK2 561 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 GDAP2Q9NXN4 497 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 MAN1B1Q9UKM7 699 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 L1RE1Q9UN81 338 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 USTQ9Y2C2 406 aa15.01□□□□□ -0.01
PCDHGC3-208ENST00000622836 CETN3O15182 167 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 AKAP3O75969 853 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 CST3P01034 146 aaPredicted RBP15□□□□□ -0.01
PCDHGC3-208ENST00000622836 EPB41P11171 864 aaKnown RBP15□□□□□ -0.01
PCDHGC3-208ENST00000622836 FSHRP23945 695 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 PPP1R2P41236 205 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 CDR1P51861 262 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 TNNC1P63316 161 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 DLG4P78352 724 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 NTHL1P78549 312 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 TWF1Q12792 350 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 PABPC1LQ4VXU2 614 aaKnown RBP15□□□□□ -0.01
PCDHGC3-208ENST00000622836 IQCEQ6IPM2 695 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 KLHL10Q6JEL2 608 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 DCP1BQ8IZD4 617 aaKnown RBP15□□□□□ -0.01
PCDHGC3-208ENST00000622836 PLEKHO2Q8TD55 490 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 TMC2Q8TDI7 906 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 ZNF516Q92618 1163 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 KHSRPQ92945 711 aaKnown RBP eCLIP15□□□□□ -0.01
PCDHGC3-208ENST00000622836 SYAP1Q96A49 352 aaPredicted RBP15□□□□□ -0.01
PCDHGC3-208ENST00000622836 EEF2KMTQ96G04 330 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 ZCWPW1Q9H0M4 648 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 MMRN2Q9H8L6 949 aa15□□□□□ -0.01
PCDHGC3-208ENST00000622836 DDX43Q9NXZ2 648 aaKnown RBP15□□□□□ -0.01
PCDHGC3-208ENST00000622836 TSC2P49815 1807 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 MTMR11A4FU01 709 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 MAPK13O15264 365 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 PAPLNO95428 1278 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 PTPN2P17706 415 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 ALDH1A3P47895 512 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 LHX1P48742 406 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 MYL6P60660 151 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 SMARCB1Q12824 385 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 DUSP4Q13115 394 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 PLD1Q13393 1074 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 NCOA4Q13772 614 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 ZNF699Q32M78 642 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 WDR72Q3MJ13 1102 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 MGAT5BQ3V5L5 792 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 ZCWPW2Q504Y3 356 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 COBLL1Q53SF7 1204 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 TDRD10Q5VZ19 366 aaKnown RBP14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 ADSSL1Q8N142 457 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 ATAD1Q8NBU5 361 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 ZNF512Q96ME7 567 aaPredicted RBP14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 SEPT5Q99719 369 aaPredicted RBP14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 RTP3Q9BQQ7 232 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 CORO1BQ9BR76 489 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 GZF1Q9H116 711 aaPredicted RBP14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 EPHX3Q9H6B9 360 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 HCFC1R1Q9NWW0 138 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 DNMT3BQ9UBC3 853 aaKnown RBP14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 NXF1Q9UBU9 619 aaKnown RBP14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 LIMD1Q9UGP4 676 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 SLC27A5Q9Y2P5 690 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 YIPF1Q9Y548 306 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 MUC3AQ02505 3323 aa14.99□□□□□ -0.01
PCDHGC3-208ENST00000622836 PI4K2BG5E9Z4 385 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 GOLGA6L22H0YM25 854 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 IKBKBO14920 756 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 POU2F2P09086 479 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 TRIM49P0CI25 452 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 TRIM49CP0CI26 452 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 ACAT1P24752 427 aaKnown RBP14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 PCSK1P29120 753 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 ATICP31939 592 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 PIK3CAP42336 1068 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 EPHB3P54753 998 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 CLDN10P78369 228 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 FKBP3Q00688 224 aaKnown RBP14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 LRRC63Q05C16 580 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 SOWAHAQ2M3V2 549 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 ANKRD40Q6AI12 368 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 CENPPQ6IPU0 288 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 DPH6Q7L8W6 267 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 ZDHHC14Q8IZN3 488 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 SPATA18Q8TC71 538 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 FAM200AQ8TCP9 573 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 C2orf15Q8WU43 125 aaKnown RBP14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 DHTKD1Q96HY7 919 aaPredicted RBP14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 ACBD6Q9BR61 282 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 SNX25Q9H3E2 840 aa14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 ABI2Q9NYB9 513 aaPredicted RBP14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 MRPS23Q9Y3D9 190 aaKnown RBP14.98□□□□□ -0.01
PCDHGC3-208ENST00000622836 DENND4AQ7Z401 1863 aa14.97□□□□□ -0.01
PCDHGC3-208ENST00000622836 TRIM49BA6NDI0 452 aa14.97□□□□□ -0.01
PCDHGC3-208ENST00000622836 C4BPAP04003 597 aaKnown RBP14.97□□□□□ -0.01
PCDHGC3-208ENST00000622836 RHOP08100 348 aa14.97□□□□□ -0.01
PCDHGC3-208ENST00000622836 CCNE1P24864 410 aa14.97□□□□□ -0.01
PCDHGC3-208ENST00000622836 TUFMP49411 452 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms