RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 SLC15A2Q16348 729 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 TBC1D10BQ4KMP7 808 aaPredicted RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 LPCAT4Q643R3 524 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 POTEHQ6S545 545 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 PIK3AP1Q6ZUJ8 805 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 DNAAF5Q86Y56 855 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 TMEM151BQ8IW70 566 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 TTC39CQ8N584 583 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 FANCBQ8NB91 859 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 PPP4R1Q8TF05 950 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 GDPD5Q8WTR4 605 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 ZKSCAN3Q9BRR0 538 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 RPAP3Q9H6T3 665 aaPredicted RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 GPAMQ9HCL2 828 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 SATB2Q9UPW6 733 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 PABPN1LA6NDY0 278 aaKnown RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 CYTH3O43739 400 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 EIF2S1P05198 315 aaKnown RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 PABPC1P11940 636 aaKnown RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 CPA2P48052 419 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 NR1H2P55055 460 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 ACTR3P61158 418 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 PDK4Q16654 411 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 SHROOM1Q2M3G4 852 aaPredicted RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 DTHD1Q6ZMT9 781 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 KIF6Q6ZMV9 814 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 OTOAQ7RTW8 1153 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 ATG9AQ7Z3C6 839 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 BPHLQ86WA6 291 aaPredicted RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 FAM172AQ8WUF8 416 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 EME1Q96AY2 570 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 SH3KBP1Q96B97 665 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 HES6Q96HZ4 224 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 UIMC1Q96RL1 719 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 TSG101Q99816 390 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 THTPAQ9BU02 230 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 C2orf49Q9BVC5 232 aaPredicted RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 SEMA6BQ9H3T3 888 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 VTA1Q9NP79 307 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 MAFFQ9ULX9 164 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 ZBTB1Q9Y2K1 713 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 PTPN22Q9Y2R2 807 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.31□□□□□ -1.08
VPS11-209ENST00000622309 ACTL7BQ9Y614 415 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 AFDNP55196 1824 aaKnown RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 GOLGB1Q14789 3259 aaKnown RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 BUD23O43709 281 aaKnown RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 TNFAIP8O95379 198 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 HSPA1AP0DMV8 641 aaKnown RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 HSPA1BP0DMV9 641 aaKnown RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 POLR2EP19388 210 aaKnown RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 PMLP29590 882 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 PTK2Q05397 1052 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 ATP1A4Q13733 1029 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 NCOA4Q13772 614 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 TRIP10Q15642 601 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 IL17AQ16552 155 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 FAM209AQ5JX71 171 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 TMEM63BQ5T3F8 832 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 PPP2R2DQ66LE6 453 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 ZNF410Q86VK4 478 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 TMPRSS6Q8IU80 811 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 SLC25A41Q8N5S1 370 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 ALLCQ8N6M5 410 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 FERD3LQ96RJ6 166 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 PHF20Q9BVI0 1012 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 RNF26Q9BY78 433 aaPredicted RBP8.31□□□□□ -1.08
VPS11-209ENST00000622309 TRIM55Q9BYV6 548 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 QPCTLQ9NXS2 382 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 PLK2Q9NYY3 685 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 MYH4Q9Y623 1939 aa8.31□□□□□ -1.08
VPS11-209ENST00000622309 H3BRJ5 948 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 TNFRSF10AO00220 468 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 KRT75O95678 551 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 ZBTB48P10074 688 aaPredicted RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 RARBP10826 455 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 MUTP22033 750 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 CA4P22748 312 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 PIK3CAP42336 1068 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 PHKA2P46019 1235 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 GSSP48637 474 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 MXI1P50539 228 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 RCAN1P53805 252 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 HIRAP54198 1017 aaPredicted RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 RPL26P61254 145 aaKnown RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 ARL6IP4Q66PJ3 421 aaKnown RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 BORAQ6PGQ7 559 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 IYDQ6PHW0 289 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 CCDC137Q6PK04 289 aaKnown RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 DCDC5Q6ZRR9 648 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 SLFN11Q7Z7L1 901 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 BRSK2Q8IWQ3 736 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 LILRB1Q8NHL6 650 aaPredicted RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 ART4Q93070 314 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 BORCS5Q969J3 196 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 TBC1D20Q96BZ9 403 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 GCNAQ96QF7 691 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 PANX3Q96QZ0 392 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 PRPF18Q99633 342 aaKnown RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 SENP6Q9GZR1 1112 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms