RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TCF7L1Q9HCS4 588 aa5.71□□□□□ -1.5
BRCA1-229ENST00000621897 LMBRD1Q9NUN5 540 aa5.71□□□□□ -1.5
BRCA1-229ENST00000621897 FEZ2Q9UHY8 353 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-229ENST00000621897 ADM5C9JUS6 153 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 VPS4BO75351 444 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 ABLIM3O94929 683 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 ARIH2O95376 493 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 IGLV2-14P01704 120 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 RARBP10826 455 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 TYRP14679 529 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 TOB1P50616 345 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-229ENST00000621897 TXNRD1Q16881 649 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 KAZNQ674X7 775 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 ARHGEF25Q86VW2 580 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 FAM9AQ8IZU1 332 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-229ENST00000621897 PSD4Q8NDX1 1056 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 MVB12AQ96EY5 273 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 SEMA4GQ9NTN9 838 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 ASB6Q9NWX5 421 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 PCDHA1Q9Y5I3 950 aa5.7□□□□□ -1.5
BRCA1-229ENST00000621897 hCG_2014768A0A024R1R8 64 aa5.69□□□□□ -1.5
BRCA1-229ENST00000621897 MASP2O00187 686 aa5.69□□□□□ -1.5
BRCA1-229ENST00000621897 ALDH1L1O75891 902 aa5.69□□□□□ -1.5
BRCA1-229ENST00000621897 RHOP08100 348 aa5.69□□□□□ -1.5
BRCA1-229ENST00000621897 AKAP5P24588 427 aa5.69□□□□□ -1.5
BRCA1-229ENST00000621897 MCL1Q07820 350 aa5.69□□□□□ -1.5
BRCA1-229ENST00000621897 TCF15Q12870 199 aa5.69□□□□□ -1.5
BRCA1-229ENST00000621897 BOP1Q14137 746 aaKnown RBP5.69□□□□□ -1.5
BRCA1-229ENST00000621897 PLS1Q14651 629 aa5.69□□□□□ -1.5
BRCA1-229ENST00000621897 TTF1Q15361 905 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-229ENST00000621897 CCDC142Q17RM4 750 aa5.69□□□□□ -1.5
BRCA1-229ENST00000621897 PPP1R32Q7Z5V6 425 aa5.69□□□□□ -1.5
BRCA1-229ENST00000621897 CELF5Q8N6W0 485 aaKnown RBP5.69□□□□□ -1.5
BRCA1-229ENST00000621897 HPS3Q969F9 1004 aa5.69□□□□□ -1.5
BRCA1-229ENST00000621897 CNPPD1Q9BV87 410 aa5.69□□□□□ -1.5
BRCA1-229ENST00000621897 DDX56Q9NY93 547 aaKnown RBP5.69□□□□□ -1.5
BRCA1-229ENST00000621897 ZDHHC8Q9ULC8 765 aa5.69□□□□□ -1.5
BRCA1-229ENST00000621897 NR2E3Q9Y5X4 410 aa5.69□□□□□ -1.5
BRCA1-229ENST00000621897 A0A0B4J269 797 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 WDR27A2RRH5 827 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 LRRC3CA6NJW4 275 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 F5H697 171 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 CHEK2O96017 543 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 ALDH2P05091 517 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 ZNF37AP17032 561 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-229ENST00000621897 GRIA3P42263 894 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 NDUFV1P49821 464 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 C21orf58P58505 322 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 NKX6-1P78426 367 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-229ENST00000621897 EXOSC9Q06265 439 aaKnown RBP5.68□□□□□ -1.5
BRCA1-229ENST00000621897 TUBB3Q13509 450 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 ZNF267Q14586 743 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-229ENST00000621897 PTPRRQ15256 657 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 KRTAP5-3Q6L8H2 238 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 USP37Q86T82 979 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 B3GALNT2Q8NCR0 500 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 VOPP1Q96AW1 172 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 PGBD1Q96JS3 809 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 NUP88Q99567 741 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-229ENST00000621897 RHOBTB2Q9BYZ6 727 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 SLC12A5Q9H2X9 1139 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 KMT5AQ9NQR1 393 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-229ENST00000621897 TYW1Q9NV66 732 aaKnown RBP5.68□□□□□ -1.5
BRCA1-229ENST00000621897 PNPOQ9NVS9 261 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 ANKRD6Q9Y2G4 727 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 TTBK1Q5TCY1 1321 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-229ENST00000621897 SPATA31A3Q5VYP0 1347 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 ADGRA2Q96PE1 1338 aa5.68□□□□□ -1.5
BRCA1-229ENST00000621897 H3BUI4 141 aa5.67□□□□□ -1.5
BRCA1-229ENST00000621897 M0QYG6 137 aa5.67□□□□□ -1.5
BRCA1-229ENST00000621897 PDGFRBP09619 1106 aa5.67□□□□□ -1.5
BRCA1-229ENST00000621897 HDCP19113 662 aa5.67□□□□□ -1.5
BRCA1-229ENST00000621897 ELLP55199 621 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-229ENST00000621897 ANAPC15P60006 121 aa5.67□□□□□ -1.5
BRCA1-229ENST00000621897 NBPF8Q3BBV2 869 aa5.67□□□□□ -1.5
BRCA1-229ENST00000621897 ATAT1Q5SQI0 421 aa5.67□□□□□ -1.5
BRCA1-229ENST00000621897 SYCE2Q6PIF2 218 aa5.67□□□□□ -1.5
BRCA1-229ENST00000621897 GRAMD1CQ8IYS0 662 aa5.67□□□□□ -1.5
BRCA1-229ENST00000621897 SLC35A4Q96G79 324 aa5.67□□□□□ -1.5
BRCA1-229ENST00000621897 HEPHQ9BQS7 1158 aa5.67□□□□□ -1.5
BRCA1-229ENST00000621897 RTFDC1Q9BY42 306 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-229ENST00000621897 SLC17A6Q9P2U8 582 aa5.67□□□□□ -1.5
BRCA1-229ENST00000621897 LINC00473A8K010 186 aa5.66□□□□□ -1.5
BRCA1-229ENST00000621897 MRPS21P82921 87 aaKnown RBP5.66□□□□□ -1.5
BRCA1-229ENST00000621897 ITIH3Q06033 890 aa5.66□□□□□ -1.5
BRCA1-229ENST00000621897 PIN1Q13526 163 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-229ENST00000621897 COLEC12Q5KU26 742 aa5.66□□□□□ -1.5
BRCA1-229ENST00000621897 RBM20Q5T481 1227 aaKnown RBP5.66□□□□□ -1.5
BRCA1-229ENST00000621897 VPS53Q5VIR6 699 aa5.66□□□□□ -1.5
BRCA1-229ENST00000621897 FAM46DQ8NEK8 389 aa5.66□□□□□ -1.5
BRCA1-229ENST00000621897 PLBD2Q8NHP8 589 aa5.66□□□□□ -1.5
BRCA1-229ENST00000621897 ZNF384Q8TF68 577 aa5.66□□□□□ -1.5
BRCA1-229ENST00000621897 FAM167AQ96KS9 214 aa5.66□□□□□ -1.5
BRCA1-229ENST00000621897 UROC1Q96N76 676 aa5.66□□□□□ -1.5
BRCA1-229ENST00000621897 MAP3K14Q99558 947 aa5.66□□□□□ -1.5
BRCA1-229ENST00000621897 CGRRF1Q99675 332 aa5.66□□□□□ -1.5
BRCA1-229ENST00000621897 SPATA5L1Q9BVQ7 753 aa5.66□□□□□ -1.5
BRCA1-229ENST00000621897 AMBRA1Q9C0C7 1298 aa5.66□□□□□ -1.5
BRCA1-229ENST00000621897 ARPP21Q9UBL0 812 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms