RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 GOLGA6L9A6NEM1 432 aa16.96■□□□□ 0.31
CBWD3-216ENST00000621396 P4HA1P13674 534 aa16.96■□□□□ 0.31
CBWD3-216ENST00000621396 CSF2RAP15509 400 aa16.96■□□□□ 0.31
CBWD3-216ENST00000621396 C1orf53Q5VUE5 145 aa16.96■□□□□ 0.31
CBWD3-216ENST00000621396 ACOT1Q86TX2 421 aa16.96■□□□□ 0.31
CBWD3-216ENST00000621396 HEXIM2Q96MH2 286 aaKnown RBP16.96■□□□□ 0.31
CBWD3-216ENST00000621396 FTHL17Q9BXU8 183 aa16.96■□□□□ 0.31
CBWD3-216ENST00000621396 DNAJB4Q9UDY4 337 aa16.96■□□□□ 0.31
CBWD3-216ENST00000621396 L1RE1Q9UN81 338 aa16.96■□□□□ 0.31
CBWD3-216ENST00000621396 H2AFZP0C0S5 128 aa16.96■□□□□ 0.3
CBWD3-216ENST00000621396 PBX3P40426 434 aa16.96■□□□□ 0.3
CBWD3-216ENST00000621396 UPP1Q16831 310 aa16.96■□□□□ 0.3
CBWD3-216ENST00000621396 GLB1LQ6UWU2 654 aa16.96■□□□□ 0.3
CBWD3-216ENST00000621396 H2AFVQ71UI9 128 aa16.96■□□□□ 0.3
CBWD3-216ENST00000621396 ANKLE1Q8NAG6 615 aa16.96■□□□□ 0.3
CBWD3-216ENST00000621396 KBTBD7Q8WVZ9 684 aa16.96■□□□□ 0.3
CBWD3-216ENST00000621396 SECISBP2LQ93073 1101 aaKnown RBP16.96■□□□□ 0.3
CBWD3-216ENST00000621396 TMEM176AQ96HP8 235 aa16.96■□□□□ 0.3
CBWD3-216ENST00000621396 FAM49BQ9NUQ9 324 aa16.96■□□□□ 0.3
CBWD3-216ENST00000621396 SLC38A7Q9NVC3 462 aa16.96■□□□□ 0.3
CBWD3-216ENST00000621396 MYO1AQ9UBC5 1043 aa16.96■□□□□ 0.3
CBWD3-216ENST00000621396 ACRP10323 421 aa16.95■□□□□ 0.3
CBWD3-216ENST00000621396 CYP3A5P20815 502 aa16.95■□□□□ 0.3
CBWD3-216ENST00000621396 ACAT1P24752 427 aaKnown RBP16.95■□□□□ 0.3
CBWD3-216ENST00000621396 LRPAP1P30533 357 aa16.95■□□□□ 0.3
CBWD3-216ENST00000621396 NOP2P46087 812 aaKnown RBP16.95■□□□□ 0.3
CBWD3-216ENST00000621396 BRCC3P46736 316 aa16.95■□□□□ 0.3
CBWD3-216ENST00000621396 FAM189BP81408 668 aa16.95■□□□□ 0.3
CBWD3-216ENST00000621396 BARX2Q9UMQ3 279 aaPredicted RBP16.95■□□□□ 0.3
CBWD3-216ENST00000621396 PDCD11Q14690 1871 aaKnown RBP16.95■□□□□ 0.3
CBWD3-216ENST00000621396 CYB561D2O14569 222 aa16.95■□□□□ 0.3
CBWD3-216ENST00000621396 BPIFB4P59827 614 aa16.95■□□□□ 0.3
CBWD3-216ENST00000621396 RNASELQ05823 741 aaKnown RBP16.95■□□□□ 0.3
CBWD3-216ENST00000621396 WSCD1Q658N2 575 aa16.95■□□□□ 0.3
CBWD3-216ENST00000621396 FAM117BQ6P1L5 589 aa16.95■□□□□ 0.3
CBWD3-216ENST00000621396 PCDHB7Q9Y5E2 793 aa16.95■□□□□ 0.3
CBWD3-216ENST00000621396 A8MXQ7 604 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 PJA2O43164 708 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 ATP2C2O75185 946 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 STAU1O95793 577 aaKnown RBP16.94■□□□□ 0.3
CBWD3-216ENST00000621396 EOMESO95936 686 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 SKIP12755 728 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 UNGP13051 313 aaPredicted RBP16.94■□□□□ 0.3
CBWD3-216ENST00000621396 PDCL2Q8N4E4 241 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 APPL2Q8NEU8 664 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 ZNF560Q96MR9 790 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 TBC1D13Q9NVG8 400 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 PRG3Q9Y2Y8 225 aaPredicted RBP16.94■□□□□ 0.3
CBWD3-216ENST00000621396 DNA2P51530 1060 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 PSMC1P62191 440 aaKnown RBP16.94■□□□□ 0.3
CBWD3-216ENST00000621396 CLEC16AQ2KHT3 1053 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 SV2CQ496J9 727 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 TIGD5Q53EQ6 642 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 C1orf131Q8NDD1 294 aaKnown RBP16.94■□□□□ 0.3
CBWD3-216ENST00000621396 UBA3Q8TBC4 463 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 SENP8Q96LD8 212 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 ISCUQ9H1K1 167 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 TJP2Q9UDY2 1190 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 COG5Q9UP83 839 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 HYOU1Q9Y4L1 999 aa16.94■□□□□ 0.3
CBWD3-216ENST00000621396 CHD7Q9P2D1 2997 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 PIK3R2O00459 728 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 HUS1O60921 280 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 CXCL10P02778 98 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 RAG1P15918 1043 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 INCA1Q0VD86 236 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 GRIK3Q13003 919 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 NOMO2Q5JPE7 1267 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 DENND1BQ6P3S1 775 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 WDTC1Q8N5D0 677 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 KIF18AQ8NI77 898 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 SLC35G2Q8TBE7 412 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 CTNNBL1Q8WYA6 563 aaPredicted RBP16.93■□□□□ 0.3
CBWD3-216ENST00000621396 PSMB7Q99436 277 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 C11orf70Q9BRQ4 267 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 NT5C1AQ9BXI3 368 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 CYP3A43Q9HB55 503 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 LUC7LQ9NQ29 371 aaKnown RBP16.93■□□□□ 0.3
CBWD3-216ENST00000621396 TMEM161AQ9NX61 479 aa16.93■□□□□ 0.3
CBWD3-216ENST00000621396 PACSIN2Q9UNF0 486 aaPredicted RBP16.93■□□□□ 0.3
CBWD3-216ENST00000621396 RTN2O75298 545 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 KIF4AO95239 1232 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 CASQ1P31415 396 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 GNL1P36915 607 aaPredicted RBP16.92■□□□□ 0.3
CBWD3-216ENST00000621396 OSTM1Q86WC4 334 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 ADGRF2Q8IZF7 708 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 ABI1Q8IZP0 508 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 BTBD6Q96KE9 485 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 TSGA10Q9BZW7 698 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 UBN1Q9NPG3 1134 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 GDAP2Q9NXN4 497 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 CYTH4Q9UIA0 394 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 LRFN2Q9ULH4 789 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 NT5C1B-RDH14C9J2C7 533 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 NCK2O43639 380 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 PALMO75781 387 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 GJB6O95452 261 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 CYP1A1P04798 512 aaPredicted RBP16.92■□□□□ 0.3
CBWD3-216ENST00000621396 ANXA13P27216 316 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 PNPLA4P41247 253 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms