RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 CARD9Q9H257 536 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 NEUROG2Q9H2A3 272 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 SNX25Q9H3E2 840 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 KCND2Q9NZV8 630 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 PCDHA2Q9Y5H9 948 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 SNCAIPQ9Y6H5 919 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 CACNA1SQ13698 1873 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 EIF4E1BA6NMX2 242 aaKnown RBP9.57□□□□□ -0.88
GGA3-222ENST00000621217 M0QYV0 167 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 LMNAP02545 664 aaKnown RBP9.57□□□□□ -0.88
GGA3-222ENST00000621217 SHBGP04278 402 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 ITGB3P05106 788 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 CXCL8P10145 99 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 HSPA6P17066 643 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 PSMC1P62191 440 aaKnown RBP9.57□□□□□ -0.88
GGA3-222ENST00000621217 ZBED8Q8IZ13 594 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 SMC1BQ8NDV3 1235 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 ACTRT1Q8TDG2 376 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 OSBPL1AQ9BXW6 950 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 EPN3Q9H201 632 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 SLX4Q8IY92 1834 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 TCRBV7S2A1N4TA0A589 114 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 ARHGAP42A6NI28 874 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 FOXO6A8MYZ6 492 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 CXCL11O14625 94 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 HNRNPCP07910 306 aaKnown RBP eCLIP9.57□□□□□ -0.88
GGA3-222ENST00000621217 GTF2A2P52657 109 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 CDH8P55286 799 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 EIF3BP55884 814 aaKnown RBP9.57□□□□□ -0.88
GGA3-222ENST00000621217 IFI35P80217 286 aaPredicted RBP9.57□□□□□ -0.88
GGA3-222ENST00000621217 LAMTOR4Q0VGL1 99 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 PTGISQ16647 500 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 ATP13A4Q4VNC1 1196 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 C6orf118Q5T5N4 469 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 ZNF449Q6P9G9 518 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 C4orf33Q8N1A6 199 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 PDCD7Q8N8D1 485 aaKnown RBP9.57□□□□□ -0.88
GGA3-222ENST00000621217 ASAP3Q8TDY4 903 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 PARD3BQ8TEW8 1205 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 SEMA4DQ92854 862 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 DDX23Q9BUQ8 820 aaKnown RBP9.57□□□□□ -0.88
GGA3-222ENST00000621217 PLIN4Q96Q06 1357 aa9.57□□□□□ -0.88
GGA3-222ENST00000621217 COILP38432 576 aaPredicted RBP9.56□□□□□ -0.88
GGA3-222ENST00000621217 ARSEP51690 589 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 ITGA8P53708 1063 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 TPD52P55327 224 aaPredicted RBP9.56□□□□□ -0.88
GGA3-222ENST00000621217 P3H1Q32P28 736 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 TMEM35BQ8NCS4 154 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 EPS8L1Q8TE68 723 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 CD248Q9HCU0 757 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 ATRNL1Q5VV63 1379 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 ZNF536O15090 1300 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 HBP1O60381 514 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 YBX3P16989 372 aaKnown RBP eCLIP9.56□□□□□ -0.884e-6■□□□□ 8.3
GGA3-222ENST00000621217 RPL21P46778 160 aaKnown RBP9.56□□□□□ -0.88
GGA3-222ENST00000621217 HSD17B4P51659 736 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 MYL6P60660 151 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 YWHAEP62258 255 aaKnown RBP9.56□□□□□ -0.88
GGA3-222ENST00000621217 IL9RQ01113 521 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 CDR2Q01850 454 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 ZNF844Q08AG5 666 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 MXD4Q14582 209 aaPredicted RBP9.56□□□□□ -0.88
GGA3-222ENST00000621217 DARS2Q6PI48 645 aaKnown RBP9.56□□□□□ -0.88
GGA3-222ENST00000621217 NME8Q8N427 588 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 BSNDQ8WZ55 320 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 SGSM3Q96HU1 749 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 KIAA1586Q9HCI6 787 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 CHCHD3Q9NX63 227 aaKnown RBP9.56□□□□□ -0.88
GGA3-222ENST00000621217 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.56□□□□□ -0.88
GGA3-222ENST00000621217 COG5Q9UP83 839 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 UBE4BO95155 1302 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 CCDC88AQ3V6T2 1871 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 A8MXQ7 604 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 DCDC2CA8MYV0 355 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 TCP11X1B4DZS4 312 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 I3L4J1 428 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 DIAPH2O60879 1101 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 SNUPNO95149 360 aaKnown RBP9.56□□□□□ -0.88
GGA3-222ENST00000621217 RARAP10276 462 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 EFNA5P52803 228 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 ADCY2Q08462 1091 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 DHX34Q14147 1143 aaKnown RBP9.56□□□□□ -0.88
GGA3-222ENST00000621217 ASTE1Q2TB18 679 aaPredicted RBP9.56□□□□□ -0.88
GGA3-222ENST00000621217 DSTYKQ6XUX3 929 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 PLEKHH3Q7Z736 793 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 RHOT1Q8IXI2 618 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 EMC1Q8N766 993 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 MYCBPAPQ8TBZ2 947 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 ACAP3Q96P50 834 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 PCDHB18PQ96TA0 734 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 OSBPL8Q9BZF1 889 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 NACA2Q9H009 215 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 TXNRD2Q9NNW7 524 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 GDF3Q9NR23 364 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 CHST7Q9NS84 486 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 AFG3L2Q9Y4W6 797 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 MRPL42Q9Y6G3 142 aaKnown RBP9.56□□□□□ -0.88
GGA3-222ENST00000621217 FAM187AA6NFU0 413 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 B4GALT5O43286 388 aa9.56□□□□□ -0.88
GGA3-222ENST00000621217 NPTXRO95502 500 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms