RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 ZNF536O15090 1300 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 COL24A1Q17RW2 1714 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 A0A1W2PQ67 120 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 CCDC160A6NGH7 325 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 RIPK2O43353 540 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 MSH2P43246 934 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 ITGA7Q13683 1181 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 DHX34Q14147 1143 aaKnown RBP11.3□□□□□ -0.6
CDH1-214ENST00000621016 SCARA5Q6ZMJ2 495 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 FAM71AQ8IYT1 594 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 WDR60Q8WVS4 1066 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 DTNBP1Q96EV8 351 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 INIPQ9NRY2 104 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 PCDHB4Q9Y5E5 795 aa11.3□□□□□ -0.6
CDH1-214ENST00000621016 ADGRA3Q8IWK6 1321 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 TMEM120BA0PK00 339 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 ETS1P14921 441 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 PIK3CAP42336 1068 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 WNT7BP56706 349 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 PSMC5P62195 406 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 PGM5Q15124 567 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 AGBL2Q5U5Z8 902 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 FAM160B2Q86V87 743 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 SMC1BQ8NDV3 1235 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 TMEM161BQ8NDZ6 487 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 SUPT20HQ8NEM7 779 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 CLEC4DQ8WXI8 215 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 PPP1R16BQ96T49 567 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 DDX18Q9NVP1 670 aaKnown RBP11.29□□□□□ -0.6
CDH1-214ENST00000621016 SAE1Q9UBE0 346 aaPredicted RBP11.29□□□□□ -0.6
CDH1-214ENST00000621016 ANAPC5Q9UJX4 755 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 FBXO9Q9UK97 447 aaPredicted RBP11.29□□□□□ -0.6
CDH1-214ENST00000621016 SPATA31A6Q5VVP1 1343 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 FAM187AA6NFU0 413 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 A6NJR5 290 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 WDR64B1ANS9 1081 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 ZNF862O60290 1169 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 DRD4P21917 467 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 CDR2Q01850 454 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 ORC1Q13415 861 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 WDR44Q5JSH3 913 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 SNRNP48Q6IEG0 339 aaKnown RBP11.29□□□□□ -0.6
CDH1-214ENST00000621016 PPP1R2P3Q6NXS1 205 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 SCUBE1Q8IWY4 988 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 RNF146Q9NTX7 359 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 DOLKQ9UPQ8 538 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 SCN9AQ15858 1988 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 DNAH12Q6ZR08 3092 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 SPDYE16A6NNV3 312 aaPredicted RBP11.29□□□□□ -0.6
CDH1-214ENST00000621016 PODXLO00592 558 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 P4HA2O15460 535 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 ATF2P15336 505 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 TCF4P15884 667 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 HMGCS2P54868 508 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 EIF3BP55884 814 aaKnown RBP11.29□□□□□ -0.6
CDH1-214ENST00000621016 GRAMD4Q6IC98 578 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 DLK2Q6UY11 383 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 TRPM8Q7Z2W7 1104 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 CEP70Q8NHQ1 597 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 HELQQ8TDG4 1101 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 WNT8AQ9H1J5 351 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 ZNF148Q9UQR1 794 aa11.29□□□□□ -0.6
CDH1-214ENST00000621016 PFASO15067 1338 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 TMEM221A6NGB7 291 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 MARK3P27448 753 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 SERPINB3P29508 390 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 NLRP11P59045 1033 aaKnown RBP11.28□□□□□ -0.6
CDH1-214ENST00000621016 AUHQ13825 339 aaKnown RBP11.28□□□□□ -0.6
CDH1-214ENST00000621016 TMED2Q15363 201 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDH1-214ENST00000621016 BRDTQ58F21 947 aaPredicted RBP11.28□□□□□ -0.6
CDH1-214ENST00000621016 C6orf118Q5T5N4 469 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 ERMARDQ5T6L9 678 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 C1orf228Q6PIY5 440 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 TMEM130Q8N3G9 435 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 PDCD2LQ9BRP1 358 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 EXOC7Q9UPT5 735 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 WDR91A4D1P6 747 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 LIN7AO14910 233 aaPredicted RBP11.28□□□□□ -0.6
CDH1-214ENST00000621016 BANF1O75531 89 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 NR3C2P08235 984 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 BRAFP15056 766 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 ANXA13P27216 316 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 POLGP54098 1239 aaPredicted RBP11.28□□□□□ -0.6
CDH1-214ENST00000621016 NCALDP61601 193 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 TSPY1Q01534 308 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 CXCL9Q07325 125 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 FOXD4Q12950 439 aaPredicted RBP11.28□□□□□ -0.6
CDH1-214ENST00000621016 ZNF268Q14587 947 aaPredicted RBP11.28□□□□□ -0.6
CDH1-214ENST00000621016 CCDC6Q16204 474 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 GPR162Q16538 588 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 LACTB2Q53H82 288 aaPredicted RBP11.28□□□□□ -0.6
CDH1-214ENST00000621016 ZNF362Q5T0B9 420 aaPredicted RBP11.28□□□□□ -0.6
CDH1-214ENST00000621016 TMEM214Q6NUQ4 689 aaKnown RBP11.28□□□□□ -0.6
CDH1-214ENST00000621016 SLC39A4Q6P5W5 647 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 IQCF2Q8IXL9 164 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 NIM1KQ8IY84 436 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 TTLL6Q8N841 843 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 DTX3LQ8TDB6 740 aa11.28□□□□□ -0.6
CDH1-214ENST00000621016 DNAJC9Q8WXX5 260 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms