RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 M0QYV0 167 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 M0QZ92 97 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 ATP8B1O43520 1251 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 GPR32O75388 356 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 HOXD8P13378 290 aaPredicted RBP10.54□□□□□ -0.72
VTA1-205ENST00000620996 IFNLR1Q8IU57 520 aaPredicted RBP10.54□□□□□ -0.72
VTA1-205ENST00000620996 GOLGA6L1Q8N7Z2 621 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 TMEM40Q8WWA1 233 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 CASKIN2Q8WXE0 1202 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 RPS6KC1Q96S38 1066 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 CXorf56Q9H5V9 222 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 TUBGCP4Q9UGJ1 667 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 PTPN22Q9Y2R2 807 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 TMEM88BA6NKF7 163 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 CCDC188H7C350 402 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 CA12O43570 354 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 RECQL4O94761 1208 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 GNAT1P11488 350 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 ELNP15502 786 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 MYO1EQ12965 1108 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 PAK2Q13177 524 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 KYAT1Q16773 422 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 TRPV1Q8NER1 839 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 TRIB2Q92519 343 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 MAGOHBQ96A72 148 aaKnown RBP10.54□□□□□ -0.72
VTA1-205ENST00000620996 TWNKQ96RR1 684 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 RUFY1Q96T51 708 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 HEMGNQ9BXL5 484 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 ERVK-5Q9HDB9 667 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.54□□□□□ -0.72
VTA1-205ENST00000620996 SCINQ9Y6U3 715 aa10.54□□□□□ -0.72
VTA1-205ENST00000620996 MED7O43513 233 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 GRM5P41594 1212 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 SNX1Q13596 522 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 SNX17Q15036 470 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 ZSCAN26Q16670 478 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 MAATS1Q7Z4T9 603 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 RASGEF1CQ8N431 466 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 RNF169Q8NCN4 708 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.53□□□□□ -0.72
VTA1-205ENST00000620996 UBA3Q8TBC4 463 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 USP6NLQ92738 828 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 CALR3Q96L12 384 aaKnown RBP10.53□□□□□ -0.72
VTA1-205ENST00000620996 PARVAQ9NVD7 372 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.53□□□□□ -0.72
VTA1-205ENST00000620996 PPEF2O14830 753 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 RARBP10826 455 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 HOXA11P31270 313 aaPredicted RBP10.53□□□□□ -0.72
VTA1-205ENST00000620996 ZNF132P52740 706 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 EPHB4P54760 987 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 HADHBP55084 474 aaKnown RBP10.53□□□□□ -0.72
VTA1-205ENST00000620996 RPL7AP62424 266 aaKnown RBP10.53□□□□□ -0.72
VTA1-205ENST00000620996 PURAQ00577 322 aaKnown RBP10.53□□□□□ -0.72
VTA1-205ENST00000620996 DR1Q01658 176 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 MAMLD1Q13495 774 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 TTC31Q49AM3 519 aaPredicted RBP10.53□□□□□ -0.72
VTA1-205ENST00000620996 PLVAPQ9BX97 442 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 MTUS1Q9ULD2 1270 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 UTP11Q9Y3A2 253 aaKnown RBP10.53□□□□□ -0.72
VTA1-205ENST00000620996 TCRBV7S2A1N4TA0A589 114 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 CALB1P05937 261 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 NDST1P52848 882 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 CDC42EP1Q00587 391 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 BIRC2Q13490 618 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 CCDC105Q8IYK2 499 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 BEST2Q8NFU1 509 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 ACSF2Q96CM8 615 aaPredicted RBP10.53□□□□□ -0.72
VTA1-205ENST00000620996 C18orf8Q96DM3 657 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 ZMAT2Q96NC0 199 aaKnown RBP10.53□□□□□ -0.72
VTA1-205ENST00000620996 FAM118BQ9BPY3 351 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 ELOVL4Q9GZR5 314 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 AVENQ9NQS1 362 aaPredicted RBP10.53□□□□□ -0.72
VTA1-205ENST00000620996 FAM49BQ9NUQ9 324 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 VPS18Q9P253 973 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 ITGA11Q9UKX5 1188 aa10.53□□□□□ -0.72
VTA1-205ENST00000620996 H3BQF6 201 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 O00370 1275 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 DAPK3O43293 454 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 MTA2O94776 668 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 FAM153BP0C7A2 387 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 CTNNA1P35221 906 aaKnown RBP10.52□□□□□ -0.72
VTA1-205ENST00000620996 RAD23BP54727 409 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 PSMC1P62191 440 aaKnown RBP10.52□□□□□ -0.72
VTA1-205ENST00000620996 PTPN11Q06124 597 aaPredicted RBP10.52□□□□□ -0.72
VTA1-205ENST00000620996 C1QBPQ07021 282 aaKnown RBP10.52□□□□□ -0.72
VTA1-205ENST00000620996 NBPF20Q3BBV1 942 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 FAM153CQ494X1 144 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 KAZNQ674X7 775 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 PACS2Q86VP3 889 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 SMC1BQ8NDV3 1235 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 OR6B3Q8NGW1 331 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 FEZF2Q8TBJ5 459 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 TMEM176AQ96HP8 235 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 SGSM3Q96HU1 749 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 PASKQ96RG2 1323 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 RNF39Q9H2S5 420 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 GOLGA2P5Q9HBQ8 144 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 TJP2Q9UDY2 1190 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 FAM153AQ9UHL3 310 aa10.52□□□□□ -0.72
VTA1-205ENST00000620996 NOD1Q9Y239 953 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms