RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 RAP1GAPP47736 663 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 AP3M2P53677 418 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 MYO1EQ12965 1108 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 SMAD4Q13485 552 aaKnown RBP11.59□□□□□ -0.55
TARDBP-223ENST00000620632 TRPC3Q13507 836 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 DCAF17Q5H9S7 520 aaPredicted RBP11.59□□□□□ -0.55
TARDBP-223ENST00000620632 CAVIN1Q6NZI2 390 aaKnown RBP11.59□□□□□ -0.55
TARDBP-223ENST00000620632 TMC5Q6UXY8 1006 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 C11orf57Q6ZUT1 292 aaPredicted RBP11.59□□□□□ -0.55
TARDBP-223ENST00000620632 USP37Q86T82 979 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 LRRTM3Q86VH5 581 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 IRF2BP1Q8IU81 584 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 ADGRF2Q8IZF7 708 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 TTC9BQ8N6N2 239 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 TOP6BLQ8N6T0 577 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 ZNF461Q8TAF7 563 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 ZNF707Q96C28 371 aaPredicted RBP11.59□□□□□ -0.55
TARDBP-223ENST00000620632 NECAB3Q96P71 396 aaPredicted RBP11.59□□□□□ -0.55
TARDBP-223ENST00000620632 PGLYRP2Q96PD5 576 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 MRPL45Q9BRJ2 306 aaKnown RBP11.59□□□□□ -0.55
TARDBP-223ENST00000620632 SDCBP2Q9H190 292 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 SMYD3Q9H7B4 428 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 VRTNQ9H8Y1 702 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 SFXN1Q9H9B4 322 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 APOBEC3GQ9HC16 384 aaKnown RBP11.59□□□□□ -0.55
TARDBP-223ENST00000620632 TMEM8AQ9HCN3 771 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 TMLHEQ9NVH6 421 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 DZANK1Q9NVP4 752 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 DSEQ9UL01 958 aa11.59□□□□□ -0.55
TARDBP-223ENST00000620632 MYH10P35580 1976 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 OBSL1O75147 1896 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 OR6C75A6NL08 312 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 HUS1O60921 280 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 ZMYND10O75800 440 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 C1RP00736 705 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 ASS1P00966 412 aaKnown RBP11.58□□□□□ -0.56
TARDBP-223ENST00000620632 C8AP07357 584 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 SRGAP2BP0DMP2 458 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 CPB1P15086 417 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 ATF2P15336 505 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 HOXB8P17481 243 aaPredicted RBP11.58□□□□□ -0.56
TARDBP-223ENST00000620632 LMO2P25791 158 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 ATICP31939 592 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 PIK3CAP42336 1068 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 MXI1P50539 228 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 MARSP56192 900 aaKnown RBP11.58□□□□□ -0.56
TARDBP-223ENST00000620632 ZNF699Q32M78 642 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 WDR72Q3MJ13 1102 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 TCERG1LQ5VWI1 586 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 SCARA5Q6ZMJ2 495 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 FRMD5Q7Z6J6 570 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 TRIM59Q8IWR1 403 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 SLC7A14Q8TBB6 771 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 SYAP1Q96A49 352 aaPredicted RBP11.58□□□□□ -0.56
TARDBP-223ENST00000620632 PKMYT1Q99640 499 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 ZCWPW1Q9H0M4 648 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 ADAM7Q9H2U9 754 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 PLEKHA4Q9H4M7 779 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 DDX43Q9NXZ2 648 aaKnown RBP11.58□□□□□ -0.56
TARDBP-223ENST00000620632 NXF1Q9UBU9 619 aaKnown RBP11.58□□□□□ -0.56
TARDBP-223ENST00000620632 ARMCX3Q9UH62 379 aaPredicted RBP11.58□□□□□ -0.56
TARDBP-223ENST00000620632 DENND4CQ5VZ89 1909 aa11.58□□□□□ -0.56
TARDBP-223ENST00000620632 CCDC195A0A1B0GUA6 201 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 MTMR11A4FU01 709 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 ATP2C2O75185 946 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 WARSP23381 471 aaKnown RBP11.57□□□□□ -0.56
TARDBP-223ENST00000620632 GTF2H1P32780 548 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 ASPAP45381 313 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 CDH8P55286 799 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 ADCY1Q08828 1119 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 GPR17Q13304 367 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 SMAD2Q15796 467 aaKnown RBP11.57□□□□□ -0.56
TARDBP-223ENST00000620632 AAK1Q2M2I8 961 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 KLHL40Q2TBA0 621 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 CCDC40Q4G0X9 1142 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 SLC39A12Q504Y0 691 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 TJAP1Q5JTD0 557 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 KRT39Q6A163 491 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 DPH6Q7L8W6 267 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 GPR149Q86SP6 731 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 METTL23Q86XA0 190 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 TMEM86AQ8N2M4 240 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 ATAD1Q8NBU5 361 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 CMASQ8NFW8 434 aaPredicted RBP11.57□□□□□ -0.56
TARDBP-223ENST00000620632 HDAC7Q8WUI4 952 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 MMS19Q96T76 1030 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 LPIN3Q9BQK8 851 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 DPEP3Q9H4B8 488 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 POMKQ9H5K3 350 aa11.57□□□□□ -0.56
TARDBP-223ENST00000620632 AFF4Q9UHB7 1163 aaKnown RBP11.57□□□□□ -0.56
TARDBP-223ENST00000620632 R3HCC1Q9Y3T6 440 aaKnown RBP11.57□□□□□ -0.56
TARDBP-223ENST00000620632 ZNF638Q14966 1978 aaKnown RBP11.57□□□□□ -0.56
TARDBP-223ENST00000620632 MYO10Q9HD67 2058 aa11.56□□□□□ -0.56
TARDBP-223ENST00000620632 ARHGEF37A1IGU5 675 aa11.56□□□□□ -0.56
TARDBP-223ENST00000620632 NRG2O14511 850 aaPredicted RBP11.56□□□□□ -0.56
TARDBP-223ENST00000620632 CCL16O15467 120 aa11.56□□□□□ -0.56
TARDBP-223ENST00000620632 TACC1O75410 805 aa11.56□□□□□ -0.56
TARDBP-223ENST00000620632 SOAT2O75908 522 aa11.56□□□□□ -0.56
TARDBP-223ENST00000620632 ERCC5P28715 1186 aaPredicted RBP11.56□□□□□ -0.56
TARDBP-223ENST00000620632 FMO5P49326 533 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms