RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 MTIF3Q9H2K0 278 aaKnown RBP8.58□□□□□ -1.04
CPNE3-209ENST00000620393 CWH43Q9H720 699 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 SMYD3Q9H7B4 428 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 RC3H2Q9HBD1 1191 aaKnown RBP8.58□□□□□ -1.04
CPNE3-209ENST00000620393 DNAJB4Q9UDY4 337 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 BARX2Q9UMQ3 279 aaPredicted RBP8.58□□□□□ -1.04
CPNE3-209ENST00000620393 PCDHB4Q9Y5E5 795 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 SLC4A7Q9Y6M7 1214 aa8.58□□□□□ -1.04
CPNE3-209ENST00000620393 SSU72P8A0A1W2PR75 194 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 ARHGEF37A1IGU5 675 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 CARNS1A5YM72 827 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 M0QZQ0 153 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 ARHGAP33O14559 1287 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 GABRDO14764 452 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 TRAPPC3O43617 180 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 NRDCO43847 1150 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 CILPO75339 1184 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 PNMA6AP0CW24 399 aaPredicted RBP8.57□□□□□ -1.04
CPNE3-209ENST00000620393 CD58P19256 250 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 WARSP23381 471 aaKnown RBP8.57□□□□□ -1.04
CPNE3-209ENST00000620393 GNL1P36915 607 aaPredicted RBP8.57□□□□□ -1.04
CPNE3-209ENST00000620393 MAGEA10P43363 369 aaPredicted RBP8.57□□□□□ -1.04
CPNE3-209ENST00000620393 BRCC3P46736 316 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 SLC11A1P49279 550 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 ALDH7A1P49419 539 aaKnown RBP8.57□□□□□ -1.04
CPNE3-209ENST00000620393 ZNF132P52740 706 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 BCAR1P56945 870 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 ARID5AQ03989 594 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 PTK2Q05397 1052 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 KLHL30Q0D2K2 578 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 INCA1Q0VD86 236 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 BTG3Q14201 252 aaPredicted RBP8.57□□□□□ -1.04
CPNE3-209ENST00000620393 WSCD1Q658N2 575 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 TMEM270Q6UE05 265 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 CYP26C1Q6V0L0 522 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 SCARA5Q6ZMJ2 495 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 UNC93AQ86WB7 457 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 TMEM139Q8IV31 216 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 HERC6Q8IVU3 1022 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 TMEM86AQ8N2M4 240 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 PDCL2Q8N4E4 241 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 SPATA18Q8TC71 538 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 WHAMMQ8TF30 809 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 SUSD3Q96L08 255 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 SLC9A7Q96T83 725 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 YME1L1Q96TA2 773 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 RAD9AQ99638 391 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 ZBED2Q9BTP6 218 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 KCNF1Q9H3M0 494 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 HAUS4Q9H6D7 363 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 NHEJ1Q9H9Q4 299 aaPredicted RBP8.57□□□□□ -1.04
CPNE3-209ENST00000620393 ARHGAP20Q9P2F6 1191 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 KIAA1257Q9ULG3 409 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 L1RE1Q9UN81 338 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 PRG3Q9Y2Y8 225 aaPredicted RBP8.57□□□□□ -1.04
CPNE3-209ENST00000620393 INSL6Q9Y581 213 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 TTC3P53804 2025 aa8.57□□□□□ -1.04
CPNE3-209ENST00000620393 F8W810 466 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 I3L4J1 428 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 ARHGAP6O43182 974 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 KIF4AO95239 1232 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 CYP11A1P05108 521 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 ITGB1P05556 798 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 PAEPP09466 180 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 CYP11B1P15538 503 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 ATP2A2P16615 1042 aaKnown RBP8.56□□□□□ -1.04
CPNE3-209ENST00000620393 TYMPP19971 482 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 LMO2P25791 158 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 ANXA13P27216 316 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 EIF4A3P38919 411 aaKnown RBP8.56□□□□□ -1.04
CPNE3-209ENST00000620393 RAP1GAPP47736 663 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 LHX1P48742 406 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 RGS19P49795 217 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 NDST1P52848 882 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 RAD23BP54727 409 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 CCZ1BP86790 482 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 CCZ1P86791 482 aaPredicted RBP8.56□□□□□ -1.04
CPNE3-209ENST00000620393 SHHQ15465 462 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 ASTE1Q2TB18 679 aaPredicted RBP8.56□□□□□ -1.04
CPNE3-209ENST00000620393 KCNT2Q6UVM3 1135 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 ZNF571Q7Z3V5 609 aaPredicted RBP8.56□□□□□ -1.04
CPNE3-209ENST00000620393 SLC47A2Q86VL8 602 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 OSTM1Q86WC4 334 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 METTL23Q86XA0 190 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 CCDC170Q8IYT3 715 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 CRYBG2Q8N1P7 616 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 SLC4A11Q8NBS3 891 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 RBBP8NLQ8NC74 664 aaPredicted RBP8.56□□□□□ -1.04
CPNE3-209ENST00000620393 OR6B3Q8NGW1 331 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 KBTBD7Q8WVZ9 684 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 TRIM44Q96DX7 344 aaPredicted RBP8.56□□□□□ -1.04
CPNE3-209ENST00000620393 TMEM176AQ96HP8 235 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 CCDC42Q96M95 316 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 AGPAT1Q99943 283 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 GDF15Q99988 308 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 SYT11Q9BT88 431 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 NT5C1AQ9BXI3 368 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 ELOVL4Q9GZR5 314 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 SNX25Q9H3E2 840 aa8.56□□□□□ -1.04
CPNE3-209ENST00000620393 MARCH5Q9NX47 278 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms