RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	FAM47DP	A6NHR8	397 aa		15.27	■□□□□ 0.04
SMTN-223	ENST00000619644	FDX1	P10109	184 aa		15.27	■□□□□ 0.04
SMTN-223	ENST00000619644	CAV1	Q03135	178 aa		15.27	■□□□□ 0.04
SMTN-223	ENST00000619644	TCEAL1	Q15170	157 aa		15.27	■□□□□ 0.04
SMTN-223	ENST00000619644	PKN2	Q16513	984 aa	Known RBP	15.27	■□□□□ 0.04
SMTN-223	ENST00000619644	HHAT	Q5VTY9	493 aa		15.27	■□□□□ 0.04
SMTN-223	ENST00000619644	RBBP8NL	Q8NC74	664 aa	Predicted RBP	15.27	■□□□□ 0.04
SMTN-223	ENST00000619644	FAM81B	Q96LP2	452 aa		15.27	■□□□□ 0.04
SMTN-223	ENST00000619644	MCEE	Q96PE7	176 aa		15.27	■□□□□ 0.04
SMTN-223	ENST00000619644	SMC6	Q96SB8	1091 aa		15.27	■□□□□ 0.04
SMTN-223	ENST00000619644	KLF6	Q99612	283 aa	Predicted RBP	15.27	■□□□□ 0.04
SMTN-223	ENST00000619644	TMEM121	Q9BTD3	319 aa		15.27	■□□□□ 0.04
SMTN-223	ENST00000619644	MRPL47	Q9HD33	250 aa	Known RBP	15.27	■□□□□ 0.04
SMTN-223	ENST00000619644	PXMP2	Q9NR77	195 aa		15.27	■□□□□ 0.04
SMTN-223	ENST00000619644	SLX4	Q8IY92	1834 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	ZBED4	O75132	1171 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	NPTXR	O95502	500 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	TAC1	P20366	129 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	SFN	P31947	248 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	BPIFB4	P59827	614 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	GCNT1	Q02742	428 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	NFX1	Q12986	1120 aa	Known RBP	15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	MAMLD1	Q13495	774 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	SMTNL2	Q2TAL5	461 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	TMEM154	Q6P9G4	183 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	PPP1R21	Q6ZMI0	780 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	ZBTB33	Q86T24	672 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	AGGF1	Q8N302	714 aa	eCLIP	15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	SPIRE2	Q8WWL2	714 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	ATP6V0A1	Q93050	837 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	TRIM11	Q96F44	468 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	TRABD	Q9H4I3	376 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	RNF146	Q9NTX7	359 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	ANKEF1	Q9NU02	776 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	AGTPBP1	Q9UPW5	1226 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	LRRC37A	A6NMS7	1700 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	CNTNAP1	P78357	1384 aa		15.27	■□□□□ 0.03
SMTN-223	ENST00000619644	ABLIM1	O14639	778 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	MAPK13	O15264	365 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	NR3C2	P08235	984 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	PRKCE	Q02156	737 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	STAT4	Q14765	748 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	CCNG2	Q16589	344 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	MFSD7	Q6UXD7	560 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	ASAP3	Q8TDY4	903 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	ATG4C	Q96DT6	458 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	ZNF668	Q96K58	619 aa	Predicted RBP	15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	CFAP57	Q96MR6	1250 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	TARS2	Q9BW92	718 aa	Known RBP	15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	RPAP3	Q9H6T3	665 aa	Predicted RBP	15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	FZD1	Q9UP38	647 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	PTPRJ	Q12913	1337 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	QSER1	Q2KHR3	1735 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644		F8VP50	259 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	PTDSS1	P48651	473 aa	Known RBP	15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	KLC1	Q07866	573 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	PDIA2	Q13087	525 aa	Known RBP	15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	SPDYE2	Q495Y8	402 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	SCARA3	Q6AZY7	606 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	SYDE1	Q6ZW31	735 aa	Predicted RBP	15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	SUPT20H	Q8NEM7	779 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	DEPTOR	Q8TB45	409 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	LRRC8C	Q8TDW0	803 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	ZWILCH	Q9H900	591 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	C2CD2	Q9Y426	696 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	IVNS1ABP	Q9Y6Y0	642 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	WDR4	P57081	412 aa	Known RBP	15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	CENPC	Q03188	943 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	LBR	Q14739	615 aa	Known RBP	15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	CYP4A22	Q5TCH4	519 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	BBOF1	Q8ND07	529 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	TTC8	Q8TAM2	541 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	GRAMD1A	Q96CP6	724 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	MSTO1	Q9BUK6	570 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	KIAA1683	Q9H0B3	1180 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	C12orf65	Q9H3J6	166 aa	Known RBP	15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	ST6GALNAC4	Q9H4F1	302 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	DCTN4	Q9UJW0	460 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	PHTF1	Q9UMS5	762 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644	CHKB	Q9Y259	395 aa		15.26	■□□□□ 0.03
SMTN-223	ENST00000619644		K7ERI5	159 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	ACADS	P16219	412 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	SNRPF	P62306	86 aa	Known RBP	15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	CUL2	Q13617	745 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	TSNAXIP1	Q2TAA8	658 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	CMPK2	Q5EBM0	449 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	STYK1	Q6J9G0	422 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	ENOSF1	Q7L5Y1	443 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	DPH6	Q7L8W6	267 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	LONP2	Q86WA8	852 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	CCDC60	Q8IWA6	550 aa	Predicted RBP	15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	15.25	■□□□□ 0.03	5e-8	■■■■■ 204.6
SMTN-223	ENST00000619644	DNAJC9	Q8WXX5	260 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	IMPG2	Q9BZV3	1241 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	ASB3	Q9Y575	518 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	PCNT	O95613	3336 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	ATP5H	O75947	161 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	EPHB2	P29323	1055 aa		15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	RPA3	P35244	121 aa	Predicted RBP	15.25	■□□□□ 0.03
SMTN-223	ENST00000619644	SGSM1	Q2NKQ1	1148 aa		15.25	■□□□□ 0.03

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms