RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 ERICH1Q86X53 443 aa20.22■□□□□ 0.83
PSPC1-206ENST00000619300 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.22■□□□□ 0.83
PSPC1-206ENST00000619300 SNX27Q96L92 541 aa20.22■□□□□ 0.83
PSPC1-206ENST00000619300 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.22■□□□□ 0.83
PSPC1-206ENST00000619300 HOXC8P31273 242 aa20.21■□□□□ 0.83
PSPC1-206ENST00000619300 PRELID2Q8N945 189 aa20.21■□□□□ 0.83
PSPC1-206ENST00000619300 TMEM40Q8WWA1 233 aa20.21■□□□□ 0.83
PSPC1-206ENST00000619300 TMEM176AQ96HP8 235 aa20.21■□□□□ 0.83
PSPC1-206ENST00000619300 CELF4Q9BZC1 486 aaKnown RBP20.21■□□□□ 0.83
PSPC1-206ENST00000619300 ELOVL4Q9GZR5 314 aa20.21■□□□□ 0.83
PSPC1-206ENST00000619300 FAM124BQ9H5Z6 455 aaPredicted RBP20.21■□□□□ 0.83
PSPC1-206ENST00000619300 TCRBV5S1A1TA0A578 114 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 TMEM191CA6NGB0 347 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 PHF2O75151 1096 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 C6orf222P0C671 652 aaPredicted RBP20.2■□□□□ 0.83
PSPC1-206ENST00000619300 FAM153BP0C7A2 387 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 CRYBB1P53674 252 aaPredicted RBP20.2■□□□□ 0.83
PSPC1-206ENST00000619300 PTPN11Q06124 597 aaPredicted RBP20.2■□□□□ 0.83
PSPC1-206ENST00000619300 ZBTB6Q15916 424 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 FAM153CQ494X1 144 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 MFSD14CQ5VZR4 134 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 ZDHHC14Q8IZN3 488 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 SEC14L1Q92503 715 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 ZMAT2Q96NC0 199 aaKnown RBP20.2■□□□□ 0.83
PSPC1-206ENST00000619300 TWNKQ96RR1 684 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 TRIM6Q9C030 488 aaPredicted RBP20.2■□□□□ 0.83
PSPC1-206ENST00000619300 CXCL16Q9H2A7 254 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.2■□□□□ 0.83
PSPC1-206ENST00000619300 IP6K2Q9UHH9 426 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 FAM153AQ9UHL3 310 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 MTUS1Q9ULD2 1270 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 UTP11Q9Y3A2 253 aaKnown RBP20.2■□□□□ 0.83
PSPC1-206ENST00000619300 HES2Q9Y543 173 aa20.2■□□□□ 0.83
PSPC1-206ENST00000619300 POLR3GO15318 223 aaPredicted RBP20.2■□□□□ 0.82
PSPC1-206ENST00000619300 GJB6O95452 261 aa20.2■□□□□ 0.82
PSPC1-206ENST00000619300 CHRNA3P32297 505 aa20.2■□□□□ 0.82
PSPC1-206ENST00000619300 MAN1A1P33908 653 aa20.2■□□□□ 0.82
PSPC1-206ENST00000619300 DR1Q01658 176 aa20.2■□□□□ 0.82
PSPC1-206ENST00000619300 GABPB1Q06547 395 aaPredicted RBP20.2■□□□□ 0.82
PSPC1-206ENST00000619300 MYO1EQ12965 1108 aa20.2■□□□□ 0.82
PSPC1-206ENST00000619300 ALKAL1Q6UXT8 129 aa20.2■□□□□ 0.82
PSPC1-206ENST00000619300 TTC39CQ8N584 583 aa20.2■□□□□ 0.82
PSPC1-206ENST00000619300 HHIPL1Q96JK4 782 aa20.2■□□□□ 0.82
PSPC1-206ENST00000619300 ARHGAP39Q9C0H5 1083 aa20.2■□□□□ 0.82
PSPC1-206ENST00000619300 MED4Q9NPJ6 270 aa20.2■□□□□ 0.82
PSPC1-206ENST00000619300 HMGXB4Q9UGU5 601 aa20.2■□□□□ 0.82
PSPC1-206ENST00000619300 BARX2Q9UMQ3 279 aaPredicted RBP20.2■□□□□ 0.82
PSPC1-206ENST00000619300 MYADML2A6NDP7 307 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 CYBAP13498 195 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 GJA9P57773 515 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 RPL7AP62424 266 aaKnown RBP20.19■□□□□ 0.82
PSPC1-206ENST00000619300 INCA1Q0VD86 236 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 ORC1Q13415 861 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 DHX34Q14147 1143 aaKnown RBP20.19■□□□□ 0.82
PSPC1-206ENST00000619300 HSP90B2PQ58FF3 399 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 GNASQ5JWF2 1037 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 DNAJC24Q6P3W2 148 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 RHOT1Q8IXI2 618 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 MAGOHBQ96A72 148 aaKnown RBP20.19■□□□□ 0.82
PSPC1-206ENST00000619300 ZBTB9Q96C00 473 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 DDX27Q96GQ7 796 aaKnown RBP20.19■□□□□ 0.82
PSPC1-206ENST00000619300 LCMT1Q9UIC8 334 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 PIN4Q9Y237 131 aaKnown RBP20.19■□□□□ 0.82
PSPC1-206ENST00000619300 TCRBV7S2A1N4TA0A589 114 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 FAM187AA6NFU0 413 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 FSCN2O14926 492 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 PSTPIP1O43586 416 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 TAP1Q03518 808 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 HLTFQ14527 1009 aaKnown RBP eCLIP20.19■□□□□ 0.82
PSPC1-206ENST00000619300 CYP1B1Q16678 543 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 DDX42Q86XP3 938 aaKnown RBP eCLIP20.19■□□□□ 0.82
PSPC1-206ENST00000619300 MTG1Q9BT17 334 aaPredicted RBP20.19■□□□□ 0.82
PSPC1-206ENST00000619300 RAB17Q9H0T7 212 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 NXF3Q9H4D5 531 aaKnown RBP20.19■□□□□ 0.82
PSPC1-206ENST00000619300 STRIP2Q9ULQ0 834 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 GABRQQ9UN88 632 aa20.19■□□□□ 0.82
PSPC1-206ENST00000619300 RECQL4O94761 1208 aa20.18■□□□□ 0.82
PSPC1-206ENST00000619300 RARAP10276 462 aa20.18■□□□□ 0.82
PSPC1-206ENST00000619300 VDRP11473 427 aa20.18■□□□□ 0.82
PSPC1-206ENST00000619300 ECHS1P30084 290 aa20.18■□□□□ 0.82
PSPC1-206ENST00000619300 TAF2Q6P1X5 1199 aa20.18■□□□□ 0.82
PSPC1-206ENST00000619300 BEST2Q8NFU1 509 aa20.18■□□□□ 0.82
PSPC1-206ENST00000619300 TRIB2Q92519 343 aa20.18■□□□□ 0.82
PSPC1-206ENST00000619300 HEXIM2Q96MH2 286 aaKnown RBP20.18■□□□□ 0.82
PSPC1-206ENST00000619300 CNTN3Q9P232 1028 aa20.18■□□□□ 0.82
PSPC1-206ENST00000619300 PCYOX1Q9UHG3 505 aa20.18■□□□□ 0.82
PSPC1-206ENST00000619300 DAPK3O43293 454 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 ALDH1A1P00352 501 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 FLT3LGP49771 235 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 NDST1P52848 882 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 TAS2R40P59535 323 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 SIX1Q15475 284 aaPredicted RBP20.17■□□□□ 0.82
PSPC1-206ENST00000619300 CNGA2Q16280 664 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 PPP1R15BQ5SWA1 713 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 DAB2IPQ5VWQ8 1189 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 DCUN1D2Q6PH85 259 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 TSEN2Q8NCE0 465 aaKnown RBP20.17■□□□□ 0.82
PSPC1-206ENST00000619300 C3orf20Q8ND61 904 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 FAM71BQ8TC56 605 aa20.17■□□□□ 0.82
PSPC1-206ENST00000619300 C18orf8Q96DM3 657 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms