RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 TTLL4Q14679 1199 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 TMED2Q15363 201 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 TRIP13Q15645 432 aaPredicted RBP7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 CNGA2Q16280 664 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 XKR3Q5GH77 459 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 FAM43BQ6ZT52 329 aaPredicted RBP7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 ARMCX2Q7L311 632 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 RPUSD2Q8IZ73 545 aaKnown RBP7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 PPFIBP2Q8ND30 876 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 LRRC8CQ8TDW0 803 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 SEPT1Q8WYJ6 367 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 SPACA7Q96KW9 195 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 ZNF317Q96PQ6 595 aaPredicted RBP7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 SENP7Q9BQF6 1050 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 NRBP2Q9NSY0 501 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 ANKEF1Q9NU02 776 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 NCANO14594 1321 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 NFASCO94856 1347 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 MAPK13O15264 365 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 ZNF862O60290 1169 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 SMIM24O75264 130 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 COILP38432 576 aaPredicted RBP7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 KCNJ1P48048 391 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 KRT17Q04695 432 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 FAM160B1Q5W0V3 765 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 ANO5Q75V66 913 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 PLEKHH3Q7Z736 793 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 PIGWQ7Z7B1 504 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 SAPCD2Q86UD0 394 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 JAZF1Q86VZ6 243 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 LNX1Q8TBB1 728 aaPredicted RBP7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 COPS5Q92905 334 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 LRRC37BQ96QE4 947 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 OSBPL1AQ9BXW6 950 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 RXFP1Q9HBX9 757 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 PDGFCQ9NRA1 345 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 SEL1LQ9UBV2 794 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 RASA4BC9J798 803 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 SPTLC1O15269 473 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 SLC16A4O15374 487 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 RASA4O43374 803 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 DCTN3O75935 186 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 DLATP10515 647 aaKnown RBP7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 KRT5P13647 590 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 CNGA1P29973 690 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 ICAM3P32942 547 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 TCF7P36402 384 aaPredicted RBP7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 CAV1Q03135 178 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 AUHQ13825 339 aaKnown RBP7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 CYP4F22Q6NT55 531 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 ZNF449Q6P9G9 518 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 METTL7BQ6UX53 244 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 ABHD15Q6UXT9 468 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 GPR142Q7Z601 462 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 USP37Q86T82 979 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 ZNF564Q8TBZ8 553 aaPredicted RBP7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 STMN2Q93045 179 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 ARHGEF26Q96DR7 871 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 TMUB1Q9BVT8 246 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 SLC5A4Q9NY91 659 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 STXBP5LQ9Y2K9 1186 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 SLC45A1Q9Y2W3 748 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 NR2E1Q9Y466 385 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 ATP8B3O60423 1300 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 CFAP99D6REC4 459 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 LYPLA2O95372 231 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 RAD23BP54727 409 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 SOX10P56693 466 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 NCALDP61601 193 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 DMP1Q13316 513 aaPredicted RBP7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 FAM110CQ1W6H9 321 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 PUS10Q3MIT2 529 aaKnown RBP7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 C11orf63Q6NUN7 778 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 EPM2AIP1Q7L775 607 aaPredicted RBP7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 SLC13A5Q86YT5 568 aaPredicted RBP7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 C1orf54Q8WWF1 131 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 SLC7A3Q8WY07 619 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 PRCCQ92733 491 aaPredicted RBP7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 SNF8Q96H20 258 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 SH3GL3Q99963 347 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 NUP85Q9BW27 656 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 CDC42EP4Q9H3Q1 356 aaKnown RBP7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 ERVK-5Q9HDB9 667 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 OLFML3Q9NRN5 406 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 PCDHA2Q9Y5H9 948 aa7.39□□□□□ -1.23
SRGAP3-213ENST00000618999 ENO4A6NNW6 628 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 EIF3DO15371 548 aaKnown RBP eCLIP7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 DDX3YO15523 660 aaKnown RBP7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 RTN2O75298 545 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 CDH16O75309 829 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 FARP2O94887 1054 aaPredicted RBP7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 TROVE2P10155 538 aaKnown RBP eCLIP7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 ITIH2P19823 946 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 EDNRBP24530 442 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 MAPK4P31152 587 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 ZNF268Q14587 947 aaPredicted RBP7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 GJC2Q5T442 439 aaPredicted RBP7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 NUDT18Q6ZVK8 323 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 ZNF720Q7Z2F6 126 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 RASAL3Q86YV0 1011 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms