RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 PAK6Q9NQU5 681 aaPredicted RBP12.79□□□□□ -0.36
SRRT-216ENST00000618262 ATP11BQ9Y2G3 1177 aa12.79□□□□□ -0.36
SRRT-216ENST00000618262 B4GALT5O43286 388 aa12.79□□□□□ -0.36
SRRT-216ENST00000618262 ZNF165P49910 485 aa12.79□□□□□ -0.36
SRRT-216ENST00000618262 NLRP12P59046 1061 aa12.79□□□□□ -0.36
SRRT-216ENST00000618262 BPIFB3P59826 476 aa12.79□□□□□ -0.36
SRRT-216ENST00000618262 MXRA7P84157 204 aa12.79□□□□□ -0.36
SRRT-216ENST00000618262 LAMTOR4Q0VGL1 99 aa12.79□□□□□ -0.36
SRRT-216ENST00000618262 UNC13DQ70J99 1090 aa12.79□□□□□ -0.36
SRRT-216ENST00000618262 KLHDC9Q8NEP7 349 aa12.79□□□□□ -0.36
SRRT-216ENST00000618262 ZNF653Q96CK0 615 aa12.79□□□□□ -0.36
SRRT-216ENST00000618262 NSRP1Q9H0G5 558 aaKnown RBP12.79□□□□□ -0.36
SRRT-216ENST00000618262 ANKEF1Q9NU02 776 aa12.79□□□□□ -0.36
SRRT-216ENST00000618262 ATAD3AQ9NVI7 634 aa12.79□□□□□ -0.36
SRRT-216ENST00000618262 MTUS1Q9ULD2 1270 aa12.79□□□□□ -0.36
SRRT-216ENST00000618262 DENND3A2RUS2 1198 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 CCDC85CA6NKD9 419 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 TSPAN1O60635 241 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 IQCF3P0C7M6 154 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 PRMT2P55345 433 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 CAPSQ13938 189 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 TARBP2Q15633 366 aaKnown RBP12.78□□□□□ -0.36
SRRT-216ENST00000618262 FUKQ8N0W3 1084 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 MED15Q96RN5 788 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 DHX33Q9H6R0 707 aaKnown RBP12.78□□□□□ -0.36
SRRT-216ENST00000618262 PRDM5Q9NQX1 630 aaPredicted RBP12.78□□□□□ -0.36
SRRT-216ENST00000618262 ANKFY1Q9P2R3 1169 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 DBR1Q9UK59 544 aaKnown RBP12.78□□□□□ -0.36
SRRT-216ENST00000618262 ZNF236Q9UL36 1845 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 GOLGA8IPA6NC78 632 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 GOLGA8JA6NMD2 632 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 B4GALT4O60513 344 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 DIAPH2O60879 1101 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 SGPL1O95470 568 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 EDN1P05305 212 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 CLTAP09496 248 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 SARSP49591 514 aaKnown RBP12.78□□□□□ -0.36
SRRT-216ENST00000618262 IRAK1P51617 712 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 NFX1Q12986 1120 aaKnown RBP12.78□□□□□ -0.36
SRRT-216ENST00000618262 DMP1Q13316 513 aaPredicted RBP12.78□□□□□ -0.36
SRRT-216ENST00000618262 MORC3Q14149 939 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 PLEKHG6Q3KR16 790 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 ZBTB33Q86T24 672 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 RNF10Q8N5U6 811 aaKnown RBP12.78□□□□□ -0.36
SRRT-216ENST00000618262 CPB2Q96IY4 423 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 NUP58Q9BVL2 599 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 TMEM106CQ9BVX2 250 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 NIFKQ9BYG3 293 aaKnown RBP12.78□□□□□ -0.36
SRRT-216ENST00000618262 DRC3Q9H069 523 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 CUEDC2Q9H467 287 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 TCF7L2Q9NQB0 619 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 TYW1Q9NV66 732 aaKnown RBP12.78□□□□□ -0.36
SRRT-216ENST00000618262 COL4A3BPQ9Y5P4 624 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 UMODL1Q5DID0 1318 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 DKC1O60832 514 aaKnown RBP eCLIP12.78□□□□□ -0.36
SRRT-216ENST00000618262 URI1O94763 535 aaPredicted RBP12.78□□□□□ -0.36
SRRT-216ENST00000618262 SKIP12755 728 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 ARID5BQ14865 1188 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 KIAA0319LQ8IZA0 1049 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 PCSK9Q8NBP7 692 aaKnown RBP12.78□□□□□ -0.36
SRRT-216ENST00000618262 GALNT6Q8NCL4 622 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 SCFD1Q8WVM8 642 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 TMEM40Q8WWA1 233 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 GLMNQ92990 594 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 VPS50Q96JG6 964 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 ZBTB45Q96K62 511 aaPredicted RBP12.78□□□□□ -0.36
SRRT-216ENST00000618262 PYM1Q9BRP8 204 aaKnown RBP12.78□□□□□ -0.36
SRRT-216ENST00000618262 MMRN2Q9H8L6 949 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 CLIC5Q9NZA1 410 aa12.78□□□□□ -0.36
SRRT-216ENST00000618262 LRRIQ3A6PVS8 624 aaPredicted RBP12.77□□□□□ -0.36
SRRT-216ENST00000618262 MAFO75444 373 aaPredicted RBP12.77□□□□□ -0.36
SRRT-216ENST00000618262 LYPLA2O95372 231 aa12.77□□□□□ -0.36
SRRT-216ENST00000618262 CCL23P55773 120 aa12.77□□□□□ -0.36
SRRT-216ENST00000618262 ACAP1Q15027 740 aa12.77□□□□□ -0.36
SRRT-216ENST00000618262 STX1AQ16623 288 aa12.77□□□□□ -0.36
SRRT-216ENST00000618262 HAUS6Q7Z4H7 955 aa12.77□□□□□ -0.36
SRRT-216ENST00000618262 GPIHBP1Q8IV16 184 aa12.77□□□□□ -0.36
SRRT-216ENST00000618262 TMEM130Q8N3G9 435 aa12.77□□□□□ -0.36
SRRT-216ENST00000618262 ARRDC4Q8NCT1 418 aa12.77□□□□□ -0.36
SRRT-216ENST00000618262 NELFBQ8WX92 580 aa12.77□□□□□ -0.36
SRRT-216ENST00000618262 PSPC1Q8WXF1 523 aaKnown RBP12.77□□□□□ -0.36
SRRT-216ENST00000618262 ELMO3Q96BJ8 720 aa12.77□□□□□ -0.36
SRRT-216ENST00000618262 FAM167AQ96KS9 214 aa12.77□□□□□ -0.36
SRRT-216ENST00000618262 EIF2AQ9BY44 585 aaKnown RBP12.77□□□□□ -0.36
SRRT-216ENST00000618262 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.77□□□□□ -0.36
SRRT-216ENST00000618262 CBX8Q9HC52 389 aa12.77□□□□□ -0.36
SRRT-216ENST00000618262 LARSQ9P2J5 1176 aaKnown RBP12.77□□□□□ -0.36
SRRT-216ENST00000618262 PRUNE2Q8WUY3 3088 aa12.77□□□□□ -0.36
SRRT-216ENST00000618262 NPTXRO95502 500 aa12.77□□□□□ -0.37
SRRT-216ENST00000618262 UBL4AP11441 157 aa12.77□□□□□ -0.37
SRRT-216ENST00000618262 CYP2J2P51589 502 aa12.77□□□□□ -0.37
SRRT-216ENST00000618262 SAMSN1Q9NSI8 373 aaKnown RBP12.77□□□□□ -0.37
SRRT-216ENST00000618262 FKBP14Q9NWM8 211 aa12.77□□□□□ -0.37
SRRT-216ENST00000618262 CIDEBQ9UHD4 219 aa12.77□□□□□ -0.37
SRRT-216ENST00000618262 LZTS1Q9Y250 596 aa12.77□□□□□ -0.37
SRRT-216ENST00000618262 GTPBP10A4D1E9 387 aaKnown RBP12.76□□□□□ -0.37
SRRT-216ENST00000618262 GRXCR2A6NFK2 248 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 BECN2A8MW95 431 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 PPP1R3GB7ZBB8 358 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 ATP1A3P13637 1013 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms