RNA–Protein interactions for RNA: ENST00000618078.1

CBX5-206, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 2,627 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-206ENST00000618078 PTPN20Q4JDL3 420 aa16.1■□□□□ 0.17
CBX5-206ENST00000618078 DUPD1Q68J44 220 aa16.1■□□□□ 0.17
CBX5-206ENST00000618078 CCDC137Q6PK04 289 aaKnown RBP16.1■□□□□ 0.17
CBX5-206ENST00000618078 ANKS1BQ7Z6G8 1248 aa16.1■□□□□ 0.17
CBX5-206ENST00000618078 C1orf54Q8WWF1 131 aa16.1■□□□□ 0.17
CBX5-206ENST00000618078 ZMAT2Q96NC0 199 aaKnown RBP16.1■□□□□ 0.17
CBX5-206ENST00000618078 ZIC5Q96T25 663 aa16.1■□□□□ 0.17
CBX5-206ENST00000618078 ERP44Q9BS26 406 aa16.1■□□□□ 0.17
CBX5-206ENST00000618078 DPP3Q9NY33 737 aa16.1■□□□□ 0.17
CBX5-206ENST00000618078 GJD2Q9UKL4 321 aa16.1■□□□□ 0.17
CBX5-206ENST00000618078 CEP350Q5VT06 3117 aa16.1■□□□□ 0.17
CBX5-206ENST00000618078 BRCA2P51587 3418 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 MBLAC1A4D2B0 266 aaPredicted RBP16.09■□□□□ 0.17
CBX5-206ENST00000618078 PPEF2O14830 753 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 HSF2BPO75031 334 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 CHRNA3P32297 505 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 CDH5P33151 784 aaPredicted RBP16.09■□□□□ 0.17
CBX5-206ENST00000618078 HSPA9P38646 679 aaKnown RBP16.09■□□□□ 0.17
CBX5-206ENST00000618078 GRM5P41594 1212 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 SSR1P43307 286 aaKnown RBP16.09■□□□□ 0.17
CBX5-206ENST00000618078 PSEN2P49810 448 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 UAP1Q16222 522 aaPredicted RBP16.09■□□□□ 0.17
CBX5-206ENST00000618078 ATG4AQ8WYN0 398 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 ARL8AQ96BM9 186 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 GCOM2Q9BZD3 368 aaPredicted RBP16.09■□□□□ 0.17
CBX5-206ENST00000618078 SNX24Q9Y343 169 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 CILPO75339 1184 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 DHX34Q14147 1143 aaKnown RBP16.09■□□□□ 0.17
CBX5-206ENST00000618078 CLUL1Q15846 466 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 CYP1B1Q16678 543 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 ATP13A4Q4VNC1 1196 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 GLRA4Q5JXX5 417 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 CFAP58Q5T655 872 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 DNAJC24Q6P3W2 148 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 IQCKQ8N0W5 287 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 SH3GL2Q99962 352 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 PTPN22Q9Y2R2 807 aa16.09■□□□□ 0.17
CBX5-206ENST00000618078 RALGAPA2Q2PPJ7 1873 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 TMEM191CA6NGB0 347 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 FSCN2O14926 492 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 KRT14P02533 472 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 CALB1P05937 261 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 COILP38432 576 aaPredicted RBP16.08■□□□□ 0.17
CBX5-206ENST00000618078 YWHAEP62258 255 aaKnown RBP16.08■□□□□ 0.17
CBX5-206ENST00000618078 ADAM17P78536 824 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 CRHR2Q13324 411 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 SNX1Q13596 522 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 PPP2R5EQ16537 467 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 ZNF771Q7L3S4 317 aaPredicted RBP16.08■□□□□ 0.17
CBX5-206ENST00000618078 ERICH1Q86X53 443 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 EIF1ADQ8N9N8 165 aaKnown RBP16.08■□□□□ 0.17
CBX5-206ENST00000618078 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.08■□□□□ 0.17
CBX5-206ENST00000618078 HEMGNQ9BXL5 484 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 RAB17Q9H0T7 212 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 NXF3Q9H4D5 531 aaKnown RBP16.08■□□□□ 0.17
CBX5-206ENST00000618078 CHST7Q9NS84 486 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.08■□□□□ 0.173e-17■■□□□ 12.1
CBX5-206ENST00000618078 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.08■□□□□ 0.17
CBX5-206ENST00000618078 PCYOX1Q9UHG3 505 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 C2CD2Q9Y426 696 aa16.08■□□□□ 0.17
CBX5-206ENST00000618078 SMIM35A0A1B0GVV1 85 aa16.08■□□□□ 0.16
CBX5-206ENST00000618078 MYADML2A6NDP7 307 aa16.08■□□□□ 0.16
CBX5-206ENST00000618078 GOLGA8SH3BPF8 625 aa16.08■□□□□ 0.16
CBX5-206ENST00000618078 TNPO2O14787 897 aaKnown RBP16.08■□□□□ 0.16
CBX5-206ENST00000618078 SLC10A3P09131 477 aa16.08■□□□□ 0.16
CBX5-206ENST00000618078 EIF4BP23588 611 aaKnown RBP16.08■□□□□ 0.16
CBX5-206ENST00000618078 PTPN11Q06124 597 aaPredicted RBP16.08■□□□□ 0.16
CBX5-206ENST00000618078 TTMPQ5BVD1 217 aa16.08■□□□□ 0.16
CBX5-206ENST00000618078 ALS2CLQ60I27 953 aa16.08■□□□□ 0.16
CBX5-206ENST00000618078 DPH6Q7L8W6 267 aa16.08■□□□□ 0.16
CBX5-206ENST00000618078 CCDC50Q8IVM0 306 aa16.08■□□□□ 0.16
CBX5-206ENST00000618078 FAM118BQ9BPY3 351 aa16.08■□□□□ 0.16
CBX5-206ENST00000618078 APOL6Q9BWW8 343 aa16.08■□□□□ 0.16
CBX5-206ENST00000618078 VRTNQ9H8Y1 702 aa16.08■□□□□ 0.16
CBX5-206ENST00000618078 FAM114A2Q9NRY5 505 aa16.08■□□□□ 0.16
CBX5-206ENST00000618078 TUBGCP4Q9UGJ1 667 aa16.08■□□□□ 0.16
CBX5-206ENST00000618078 FAM187AA6NFU0 413 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 F8VP50 259 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 HAS3O00219 553 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 DARSP14868 501 aaKnown RBP16.07■□□□□ 0.16
CBX5-206ENST00000618078 HSD17B3P37058 310 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 RGS2P41220 211 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 DCAF4L1Q3SXM0 396 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 PPP1R15BQ5SWA1 713 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 APBA2Q99767 749 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 MTUS1Q9ULD2 1270 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 R3HDM2Q9Y2K5 976 aaKnown RBP16.07■□□□□ 0.16
CBX5-206ENST00000618078 RALAP11233 206 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 ATICP31939 592 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 RPL21P46778 160 aaKnown RBP16.07■□□□□ 0.16
CBX5-206ENST00000618078 KYAT1Q16773 422 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 SGO2Q562F6 1265 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 TXNRD3NBQ6F5E7 133 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 PPP1R2P3Q6NXS1 205 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 SLC27A1Q6PCB7 646 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 DCUN1D2Q6PH85 259 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 ZDHHC24Q6UX98 284 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 RHOT1Q8IXI2 618 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 CCDC105Q8IYK2 499 aa16.07■□□□□ 0.16
CBX5-206ENST00000618078 TRPV1Q8NER1 839 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms