RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CEP72Q9P209 647 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 FBXL5Q9UKA1 691 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 PCDHB6Q9Y5E3 794 aa9.3□□□□□ -0.92
GPC6-202ENST00000617456 TICRRQ7Z2Z1 1910 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 SMIM28A0A1B0GU29 152 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 H3BQV1 296 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 H7C4K7 107 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 K7ESF4 209 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 MICAL2O94851 1124 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 PDCP20941 246 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 CNR2P34972 360 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 SMTNP53814 917 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 YARSP54577 528 aaKnown RBP9.29□□□□□ -0.92
GPC6-202ENST00000617456 DMP1Q13316 513 aaPredicted RBP9.29□□□□□ -0.92
GPC6-202ENST00000617456 ECM1Q16610 540 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 KYAT1Q16773 422 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 RINT1Q6NUQ1 792 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 C1orf186Q6ZWK4 172 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 MFSD6LQ8IWD5 586 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 TCEAL8Q8IYN2 117 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 SYT2Q8N9I0 419 aaPredicted RBP9.29□□□□□ -0.92
GPC6-202ENST00000617456 C12orf50Q8NA57 414 aaPredicted RBP9.29□□□□□ -0.92
GPC6-202ENST00000617456 FAM200AQ8TCP9 573 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 DDX1Q92499 740 aaKnown RBP9.29□□□□□ -0.92
GPC6-202ENST00000617456 RSPRY1Q96DX4 576 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 TBC1D32Q96NH3 1257 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 PPP1R9BQ96SB3 815 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 MRPL4Q9BYD3 311 aaKnown RBP9.29□□□□□ -0.92
GPC6-202ENST00000617456 ARRDC1-AS1Q9H2J1 176 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 PTPRHQ9HD43 1115 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 SLC38A7Q9NVC3 462 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 ARHGAP28Q9P2N2 729 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 ZFYVE26Q68DK2 2539 aa9.29□□□□□ -0.92
GPC6-202ENST00000617456 TRIP11Q15643 1979 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 GOLGA6CA6NDK9 693 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 GOLGA6BA6NDN3 693 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 ARNTLO00327 626 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 GOLGA6DP0CG33 693 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 MCF2P10911 925 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 HARSP12081 509 aaKnown RBP9.28□□□□□ -0.92
GPC6-202ENST00000617456 CPB1P15086 417 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 PROZP22891 400 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 PAX3P23760 479 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 GJB2P29033 226 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 PMLP29590 882 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 RPL9P32969 192 aaKnown RBP9.28□□□□□ -0.92
GPC6-202ENST00000617456 MCM4P33991 863 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 GRM5P41594 1212 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 NPTX2P47972 431 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 PXNP49023 591 aaPredicted RBP9.28□□□□□ -0.92
GPC6-202ENST00000617456 PON2Q15165 354 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 WDR44Q5JSH3 913 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 TPGS2Q68CL5 300 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 TXNDC11Q6PKC3 985 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 SASS6Q6UVJ0 657 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 ALKAL1Q6UXT8 129 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 ZPBP2Q6X784 338 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 RNF19BQ6ZMZ0 732 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 SHKBP1Q8TBC3 707 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 C18orf25Q96B23 403 aaPredicted RBP9.28□□□□□ -0.92
GPC6-202ENST00000617456 ZMAT2Q96NC0 199 aaKnown RBP9.28□□□□□ -0.92
GPC6-202ENST00000617456 ACO2Q99798 780 aaKnown RBP9.28□□□□□ -0.92
GPC6-202ENST00000617456 MMTAG2Q9BU76 263 aaKnown RBP9.28□□□□□ -0.92
GPC6-202ENST00000617456 SMOC1Q9H4F8 434 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 C8orf33Q9H7E9 229 aaPredicted RBP9.28□□□□□ -0.92
GPC6-202ENST00000617456 RXFP3Q9NSD7 469 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 GOLGA6AQ9NYA3 693 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 LARSQ9P2J5 1176 aaKnown RBP9.28□□□□□ -0.92
GPC6-202ENST00000617456 AFF4Q9UHB7 1163 aaKnown RBP9.28□□□□□ -0.92
GPC6-202ENST00000617456 ODF2LQ9ULJ1 636 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 MAFFQ9ULX9 164 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 RPS6KL1Q9Y6S9 549 aa9.28□□□□□ -0.92
GPC6-202ENST00000617456 MORC2Q9Y6X9 1032 aaPredicted RBP9.28□□□□□ -0.92
GPC6-202ENST00000617456 UQCRHLA0A096LP55 91 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 A0A1W2PRU2 124 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 CCDC169A6NNP5 214 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 SPECC1L-ADORA2AF8WAN1 911 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 DPYSL4O14531 572 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 SYN3O14994 580 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 CHADO15335 359 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 FOXD2O60548 495 aaPredicted RBP9.27□□□□□ -0.93
GPC6-202ENST00000617456 TOM1L1O75674 476 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 UQCRHP07919 91 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 PLS3P13797 630 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 KCNE1P15382 129 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 LONP1P36776 959 aaKnown RBP9.27□□□□□ -0.93
GPC6-202ENST00000617456 POU5F1Q01860 360 aaKnown RBP9.27□□□□□ -0.93
GPC6-202ENST00000617456 CUL4AQ13619 759 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 MRPL58Q14197 206 aaKnown RBP9.27□□□□□ -0.93
GPC6-202ENST00000617456 IL17AQ16552 155 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 ZNF568Q3ZCX4 644 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 DGKKQ5KSL6 1271 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 STXBP5Q5T5C0 1151 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 LARP1BQ659C4 914 aaKnown RBP9.27□□□□□ -0.93
GPC6-202ENST00000617456 MCTP1Q6DN14 999 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 ZNF280DQ6N043 979 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 WDR5BQ86VZ2 330 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 DAW1Q8N136 415 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 TMEM130Q8N3G9 435 aa9.27□□□□□ -0.93
GPC6-202ENST00000617456 LEMD2Q8NC56 503 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms