RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 CLIC4Q9Y696 253 aa19.16■□□□□ 0.66
TRAPPC3-209ENST00000616395 MORC2Q9Y6X9 1032 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC3-209ENST00000616395 DMXL2Q8TDJ6 3036 aa19.16■□□□□ 0.66
TRAPPC3-209ENST00000616395 LNP1A1A4G5 178 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 ACKR2O00590 384 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 PODXLO00592 558 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 CUTAO60888 179 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 CAVIN2O95810 425 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 CEACAM1P13688 526 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 TXKP42681 527 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 ZNF174Q15697 407 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 DCAF4L1Q3SXM0 396 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 RNF19BQ6ZMZ0 732 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 HAUS6Q7Z4H7 955 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 TMC8Q8IU68 726 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 BSNDQ8WZ55 320 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 CCDC113Q9H0I3 377 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 FAM13BQ9NYF5 915 aa19.15■□□□□ 0.66
TRAPPC3-209ENST00000616395 SPAG17Q6Q759 2223 aa19.14■□□□□ 0.65
TRAPPC3-209ENST00000616395 TAF4O00268 1085 aa19.14■□□□□ 0.65
TRAPPC3-209ENST00000616395 DCLK1O15075 740 aa19.14■□□□□ 0.65
TRAPPC3-209ENST00000616395 ORC2Q13416 577 aaPredicted RBP19.14■□□□□ 0.65
TRAPPC3-209ENST00000616395 ELF2Q15723 593 aa19.14■□□□□ 0.65
TRAPPC3-209ENST00000616395 TTC38Q5R3I4 469 aa19.14■□□□□ 0.65
TRAPPC3-209ENST00000616395 KIAA1211LQ6NV74 962 aa19.14■□□□□ 0.65
TRAPPC3-209ENST00000616395 KRI1Q8N9T8 703 aaKnown RBP19.14■□□□□ 0.65
TRAPPC3-209ENST00000616395 TMEM209Q96SK2 561 aa19.14■□□□□ 0.65
TRAPPC3-209ENST00000616395 MKNK1Q9BUB5 465 aa19.14■□□□□ 0.65
TRAPPC3-209ENST00000616395 NUP62CLQ9H1M0 184 aa19.14■□□□□ 0.65
TRAPPC3-209ENST00000616395 HOOK1Q9UJC3 728 aaKnown RBP19.14■□□□□ 0.65
TRAPPC3-209ENST00000616395 MAFFQ9ULX9 164 aa19.14■□□□□ 0.65
TRAPPC3-209ENST00000616395 YIPF1Q9Y548 306 aa19.14■□□□□ 0.65
TRAPPC3-209ENST00000616395 BCLAF3A2AJT9 711 aaKnown RBP19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 DPYSL4O14531 572 aa19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 ATG13O75143 517 aa19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 CPB1P15086 417 aa19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 CSRP1P21291 193 aaKnown RBP19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 CACNB1Q02641 598 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 ZNF280DQ6N043 979 aa19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 MCPH1Q8NEM0 835 aa19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 ANP32BQ92688 251 aaKnown RBP19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 MTMR9Q96QG7 549 aa19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 HHIPQ96QV1 700 aa19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 TTC12Q9H892 705 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 PCDHA7Q9UN72 937 aa19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 NUB1Q9Y5A7 615 aa19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 TCHHQ07283 1943 aa19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 ITPR1Q14643 2758 aa19.13■□□□□ 0.65
TRAPPC3-209ENST00000616395 TOB1P50616 345 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC3-209ENST00000616395 FAM160A1Q05DH4 1040 aa19.12■□□□□ 0.65
TRAPPC3-209ENST00000616395 ZRSR1Q15695 479 aaKnown RBP19.12■□□□□ 0.65
TRAPPC3-209ENST00000616395 FSTL4Q6MZW2 842 aa19.12■□□□□ 0.65
TRAPPC3-209ENST00000616395 CAMKK1Q8N5S9 505 aa19.12■□□□□ 0.65
TRAPPC3-209ENST00000616395 CEP120Q8N960 986 aa19.12■□□□□ 0.65
TRAPPC3-209ENST00000616395 FSIP1Q8NA03 581 aa19.12■□□□□ 0.65
TRAPPC3-209ENST00000616395 DEPTORQ8TB45 409 aa19.12■□□□□ 0.65
TRAPPC3-209ENST00000616395 ZMAT2Q96NC0 199 aaKnown RBP19.12■□□□□ 0.65
TRAPPC3-209ENST00000616395 PYM1Q9BRP8 204 aaKnown RBP19.12■□□□□ 0.65
TRAPPC3-209ENST00000616395 DNAJC25Q9H1X3 360 aa19.12■□□□□ 0.65
TRAPPC3-209ENST00000616395 TNMDQ9H2S6 317 aa19.12■□□□□ 0.65
TRAPPC3-209ENST00000616395 TMEM63CQ9P1W3 806 aa19.12■□□□□ 0.65
TRAPPC3-209ENST00000616395 PCDHA12Q9UN75 941 aa19.12■□□□□ 0.65
TRAPPC3-209ENST00000616395 LAD1O00515 517 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 HYAL3O43820 417 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 RHOBTB1O94844 696 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 XRCC6P12956 609 aaKnown RBP eCLIP19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 CMA1P23946 247 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 ITPRIPL2Q3MIP1 535 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 XKR4Q5GH76 650 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 TMEM196Q5HYL7 178 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 NT5DC1Q5TFE4 455 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 ATF7IP2Q5U623 682 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 SUSD3Q96L08 255 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 KIFC3Q9BVG8 833 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 TMEM9BQ9NQ34 198 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 SLC38A7Q9NVC3 462 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 OBP2AQ9NY56 170 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 NEUROG3Q9Y4Z2 214 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 PCDHB6Q9Y5E3 794 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 EML5Q05BV3 1969 aa19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 SETXQ7Z333 2677 aaKnown RBP19.11■□□□□ 0.65
TRAPPC3-209ENST00000616395 CDX4O14627 284 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 VNN2O95498 520 aa19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 PRAMEF12O95522 483 aa19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 OR52Z1P0C646 297 aa19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 NAMPTP43490 491 aa19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 YARSP54577 528 aaKnown RBP19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 GRSF1Q12849 480 aaKnown RBP eCLIP19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 ALKAL1Q6UXT8 129 aa19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 GAREM2Q75VX8 874 aa19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 DEFB124Q8NES8 71 aa19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 BPIFB1Q8TDL5 484 aa19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 DDX12PQ92771 950 aa19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 PGLYRP2Q96PD5 576 aa19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 CRISPLD1Q9H336 500 aa19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 TOPORSQ9NS56 1045 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC3-209ENST00000616395 GCN1Q92616 2671 aaKnown RBP19.09■□□□□ 0.65
TRAPPC3-209ENST00000616395 KHNYNO15037 678 aaKnown RBP19.09■□□□□ 0.65
TRAPPC3-209ENST00000616395 RNF40O75150 1001 aa19.09■□□□□ 0.65
TRAPPC3-209ENST00000616395 EPHB3P54753 998 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms