RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.02□□□□□ -1.29
LMO3-235ENST00000616247 TUBB6Q9BUF5 446 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 TIPINQ9BVW5 301 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 FAM192AQ9GZU8 254 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 ZNF395Q9H8N7 513 aaPredicted RBP7.02□□□□□ -1.29
LMO3-235ENST00000616247 UVRAGQ9P2Y5 699 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 ZNF212Q9UDV6 495 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 SERPINB13Q9UIV8 391 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 PPM1HQ9ULR3 514 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 ZMYM2Q9UBW7 1377 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 PIK3CDO00329 1044 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 SLC16A4O15374 487 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 SORBS3O60504 671 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 RNASEH1O60930 286 aaKnown RBP7.02□□□□□ -1.29
LMO3-235ENST00000616247 SUPT3HO75486 399 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 POTEJP0CG39 1038 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 VAV1P15498 845 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 IVDP26440 423 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 PHBP35232 272 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 FMO1Q01740 532 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 GAD2Q05329 585 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 CYP1B1Q16678 543 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 SHROOM1Q2M3G4 852 aaPredicted RBP7.02□□□□□ -1.29
LMO3-235ENST00000616247 SH2D4BQ5SQS7 431 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 GPATCH4Q5T3I0 446 aaKnown RBP7.02□□□□□ -1.29
LMO3-235ENST00000616247 TPTE2Q6XPS3 522 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 CBWD2Q8IUF1 395 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 PPM1NQ8N819 430 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 RBM15BQ8NDT2 890 aaKnown RBP7.02□□□□□ -1.29
LMO3-235ENST00000616247 OXNAD1Q96HP4 312 aaPredicted RBP7.02□□□□□ -1.29
LMO3-235ENST00000616247 OLFM3Q96PB7 478 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 GCNAQ96QF7 691 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 PAFAH2Q99487 392 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 MECRQ9BV79 373 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 TMOD2Q9NZR1 351 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 LGALS13Q9UHV8 139 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 SIPA1L3O60292 1781 aaPredicted RBP7.02□□□□□ -1.29
LMO3-235ENST00000616247 KAT6AQ92794 2004 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 FRMPD4Q14CM0 1322 aa7.02□□□□□ -1.29
LMO3-235ENST00000616247 KIF1AQ12756 1690 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 TOM1L1O75674 476 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 CYP1A1P04798 512 aaPredicted RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 GALK1P51570 392 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 PEX3P56589 373 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 TAS2R40P59535 323 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 SLC25A3Q00325 362 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 CDK16Q00536 496 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 CDC16Q13042 620 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 ALCAMQ13740 583 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 ACAP1Q15027 740 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 R3HDM1Q15032 1099 aaKnown RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 SF3B3Q15393 1217 aaKnown RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 HYIQ5T013 277 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 LIN9Q5TKA1 542 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 PPP1R18Q6NYC8 613 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 LCA5Q86VQ0 697 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 OGFOD1Q8N543 542 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 XXYLT1Q8NBI6 393 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 GSDMBQ8TAX9 411 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 ETNPPLQ8TBG4 499 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 MORC4Q8TE76 937 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 RSAD2Q8WXG1 361 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 GATA6Q92908 595 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 CFAP36Q96G28 342 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 CLMNQ96JQ2 1002 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 KREMEN1Q96MU8 473 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 TTC25Q96NG3 672 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 AMNQ9BXJ7 453 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 SENP1Q9P0U3 644 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 APPL1Q9UKG1 709 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 FAF1Q9UNN5 650 aaPredicted RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 MTO1Q9Y2Z2 717 aaKnown RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 TIAM2Q8IVF5 1701 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 COPEO14579 308 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 TP73O15350 636 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 TLR3O15455 904 aaKnown RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 HNRNPCL1O60812 293 aaKnown RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 DKC1O60832 514 aaKnown RBP eCLIP7.01□□□□□ -1.29
LMO3-235ENST00000616247 GDF11O95390 407 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 GEMIN4P57678 1058 aaKnown RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 SP4Q02446 784 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 ACAD10Q6JQN1 1059 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 ZCCHC23Q6ZST2 131 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 SYDE1Q6ZW31 735 aaPredicted RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 RAPH1Q70E73 1250 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.01□□□□□ -1.29
LMO3-235ENST00000616247 RHOT1Q8IXI2 618 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 KIFC3Q9BVG8 833 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 RTFDC1Q9BY42 306 aaPredicted RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 ZWILCHQ9H900 591 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 IFT122Q9HBG6 1241 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 HSPBP1Q9NZL4 362 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 TMEM150BA6NC51 233 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 HLA-DOAP06340 250 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 NCF2P19878 526 aaPredicted RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 CDK7P50613 346 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 AQP5P55064 265 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 PDE1CQ14123 709 aaPredicted RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 HIC1Q14526 733 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 ZNF394Q53GI3 561 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms