RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 TRADDQ15628 312 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 EFHC2Q5JST6 749 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 ZNF677Q86XU0 584 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 CISHQ9NSE2 258 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 GTF3C4Q9UKN8 822 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 TGFB1I1O43294 461 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 PPP1R37O75864 691 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 AKAP5P24588 427 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 MAGEA4P43358 317 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 CDH8P55286 799 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 ERVK-9P63128 1117 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 TFDP2Q14188 446 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 TMEM121Q9BTD3 319 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 NT5C1AQ9BXI3 368 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 SNTG2Q9NY99 539 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 A0A0A6YYK5 440 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 PJA2O43164 708 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 BNIP3LO60238 219 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 HMBSP08397 361 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 MAPTP10636 758 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 PRLRP16471 622 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 GARTP22102 1010 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 IRAK1P51617 712 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 CDKL3Q8IVW4 592 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 MCOLN2Q8IZK6 566 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 ARHGAP24Q8N264 748 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 SPATA18Q8TC71 538 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 C17orf75Q9HAS0 396 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 PFDN4Q9NQP4 134 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 C4AP0C0L4 1744 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 C4BP0C0L5 1744 aa9.39□□□□□ -0.91
PDLIM5-222ENST00000615540 M0R2N6 131 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 APRTP07741 180 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 UBA1P22314 1058 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 MAGEA9P43362 315 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 MARCKSL1P49006 195 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 LAMC2Q13753 1193 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 SLC7A14Q8TBB6 771 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 AENQ8WTP8 325 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 PGBD4Q96DM1 585 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 GDF3Q9NR23 364 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 RAB6BQ9NRW1 208 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 WRAP73Q9P2S5 460 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 ZNF263O14978 683 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 NOL4O94818 638 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 GNL1P36915 607 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 CTCFP49711 727 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 PLCB4Q15147 1175 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 PTGISQ16647 500 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 TSNAXIP1Q2TAA8 658 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 SCFD2Q8WU76 684 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 RAPGEF5Q92565 580 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 KRT35Q92764 455 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 ZBTB10Q96DT7 871 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 SEC16BQ96JE7 1060 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 PLEKHA5Q9HAU0 1116 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 LCMT1Q9UIC8 334 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 TMEM120BA0PK00 339 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 H0Y3Z8 333 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 MAPK13O15264 365 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 OGTO15294 1046 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 PSTPIP1O43586 416 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 AGTP01019 485 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 RPL21P46778 160 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 TSPY1Q01534 308 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 MFSD14CQ5VZR4 134 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 MAP4K3Q8IVH8 894 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 LMNTD2Q8IXW0 634 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 LRRN4Q8WUT4 740 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 SKA2Q8WVK7 121 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 HDAC11Q96DB2 347 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 WNK4Q96J92 1243 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 FSD1LQ9BXM9 530 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 NPHS2Q9NP85 383 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 COL18A1P39060 1754 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 ADCYAP1R1P41586 468 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 DCAF6Q58WW2 860 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 TTMPQ5BVD1 217 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 MAP1SQ66K74 1059 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 DENND5BQ6ZUT9 1274 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 SYDE1Q6ZW31 735 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 SRLQ86TD4 932 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 WDR49Q8IV35 697 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 ATP11CQ8NB49 1132 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 DNERQ8NFT8 737 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 TMC2Q8TDI7 906 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 XPO6Q96QU8 1125 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 ACTR5Q9H9F9 607 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 TXLNGQ9NUQ3 528 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 ABCF3Q9NUQ8 709 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 PRMT7Q9NVM4 692 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 TOGARAM1Q9Y4F4 1720 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 MYH2Q9UKX2 1941 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 NAV1Q8NEY1 1877 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 NWD2Q9ULI1 1742 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 GLRA2P23416 452 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 TPD52P55327 224 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 CENPCQ03188 943 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 SLC12A1Q13621 1099 aa9.38□□□□□ -0.91
PDLIM5-222ENST00000615540 METTL7BQ6UX53 244 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms