RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ALDH1A2O94788 518 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 ASGR1P07306 291 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 PDGFRBP09619 1106 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 KCNA4P22459 653 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 KIZQ2M2Z5 673 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 MCUQ8NE86 351 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 PPTC7Q8NI37 304 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 SNF8Q96H20 258 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 PPP1R16AQ96I34 528 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 CAPN11Q9UMQ6 739 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 PLA2G4CQ9UP65 541 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 AK9Q5TCS8 1911 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 ZNF541Q9H0D2 1346 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 IRF6O14896 467 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 FARP2O94887 1054 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 PYGLP06737 847 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 SMIM10L2AP0DMW4 78 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 SMIM10L2BP0DMW5 78 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 CLCN3P51790 818 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 NSUN2Q08J23 767 aaKnown RBP eCLIP10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 PDK2Q15119 407 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 FBXO47Q5MNV8 452 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 ERAP2Q6P179 960 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 BRD8Q9H0E9 1235 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 GIT1Q9Y2X7 761 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 CASZ1Q86V15 1759 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 ARHGAP10A1A4S6 786 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 ONECUT3O60422 494 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 MAP2K2P36507 400 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 PSEN1P49768 467 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 SEC23AQ15436 765 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 BOLA3Q53S33 107 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 OVOS1Q6IE37 1185 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 SLC35F6Q8N357 371 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 RAPGEF5Q92565 580 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 CCDC124Q96CT7 223 aaKnown RBP10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 RABEP2Q9H5N1 569 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 BCL2L12Q9HB09 334 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 ACKR2O00590 384 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 HMGB3O15347 200 aaKnown RBP10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 SPAG6O75602 509 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 FGBP02675 491 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 MYL4P12829 197 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 FDFT1P37268 417 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 ATXN3P54252 364 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 ADCY1Q08828 1119 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 BTNL9Q6UXG8 535 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 SLC30A10Q6XR72 485 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 EGFL8Q99944 293 aa10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 DDX20Q9UHI6 824 aaKnown RBP10.22□□□□□ -0.77
TNFRSF9-204ENST00000615230 SSU72P8A0A1W2PR75 194 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 H2AFYO75367 372 aaKnown RBP10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 TRIM49P0CI25 452 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 TRIM49CP0CI26 452 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 NCAM1P13591 858 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 SELPP16109 830 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 PHKG1Q16816 387 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 ANKRD40Q6AI12 368 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 SHC4Q6S5L8 630 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 CYP39A1Q9NYL5 469 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 ADAMTS1Q9UHI8 967 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 SPACA6W5XKT8 324 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 A0A087WUV0 522 aaPredicted RBP10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 IGF2BP3O00425 579 aaKnown RBP eCLIP10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 CYP26A1O43174 497 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 ARP10275 920 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 CYP2A6P11509 494 aaPredicted RBP10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 IGFBP4P22692 258 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 AKT1P31749 480 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 COPS2P61201 443 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 PTK6Q13882 451 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 ALS2CLQ60I27 953 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 NAPEPLDQ6IQ20 393 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 EFL1Q7Z2Z2 1120 aaKnown RBP10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 MFN1Q8IWA4 741 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 TARS2Q9BW92 718 aaKnown RBP10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 NDEL1Q9GZM8 345 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 DERAQ9Y315 318 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 TRAV19A0A0A6YYK7 116 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 TRIM49BA6NDI0 452 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 TLL1O43897 1013 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 CKMP06732 381 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 NPTX2P47972 431 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 BYSLQ13895 437 aaKnown RBP10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 ALKBH8Q96BT7 664 aaKnown RBP10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 EFHD1Q9BUP0 239 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 WDCPQ9H6R7 721 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 CYP4F11Q9HBI6 524 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 GIMAP4Q9NUV9 329 aa10.21□□□□□ -0.77
TNFRSF9-204ENST00000615230 NDUFAB1O14561 156 aa10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 FTCDO95954 541 aa10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 ADCYAP1R1P41586 468 aa10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 MTFR1Q15390 333 aa10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 TTLL9Q3SXZ7 439 aa10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 PID1Q7Z2X4 250 aa10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 FDXACB1Q9BRP7 624 aaPredicted RBP10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 C11orf49Q9H6J7 331 aa10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 A1CFQ9NQ94 594 aaKnown RBP10.21□□□□□ -0.78
TNFRSF9-204ENST00000615230 TRIM33Q9UPN9 1127 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms