RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 METTL23Q86XA0 190 aa17.98■□□□□ 0.47
CBWD3-211ENST00000615061 TCEAL8Q8IYN2 117 aa17.98■□□□□ 0.47
CBWD3-211ENST00000615061 TTC9BQ8N6N2 239 aa17.98■□□□□ 0.47
CBWD3-211ENST00000615061 ATAD1Q8NBU5 361 aa17.98■□□□□ 0.47
CBWD3-211ENST00000615061 RHOBTB2Q9BYZ6 727 aa17.98■□□□□ 0.47
CBWD3-211ENST00000615061 MUTYHQ9UIF7 546 aa17.98■□□□□ 0.47
CBWD3-211ENST00000615061 CLUHO75153 1309 aa17.98■□□□□ 0.47
CBWD3-211ENST00000615061 HUS1O60921 280 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 TRIM49P0CI25 452 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 TRIM49CP0CI26 452 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 HOXA9P31269 272 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 MYL6P60660 151 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 BIRC3Q13489 604 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 MORC3Q14149 939 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 EDRF1Q3B7T1 1238 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 SLC39A12Q504Y0 691 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 ANKRD40Q6AI12 368 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 FAM186BQ8IYM0 893 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 EPHX3Q9H6B9 360 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 LMBRD1Q9NUN5 540 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 INSL5Q9Y5Q6 135 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 TECTAO75443 2155 aa17.97■□□□□ 0.47
CBWD3-211ENST00000615061 MTMR11A4FU01 709 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 VNN1O95497 513 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 C4BPAP04003 597 aaKnown RBP17.96■□□□□ 0.47
CBWD3-211ENST00000615061 ACAT1P24752 427 aaKnown RBP17.96■□□□□ 0.47
CBWD3-211ENST00000615061 RPL13P26373 211 aaKnown RBP17.96■□□□□ 0.47
CBWD3-211ENST00000615061 DUSP4Q13115 394 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 CCDC142Q17RM4 750 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 CYP26C1Q6V0L0 522 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 OXCT2Q9BYC2 517 aaPredicted RBP17.96■□□□□ 0.47
CBWD3-211ENST00000615061 ZCWPW1Q9H0M4 648 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 DNMT3BQ9UBC3 853 aaKnown RBP17.96■□□□□ 0.47
CBWD3-211ENST00000615061 SLC27A5Q9Y2P5 690 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 NR2E1Q9Y466 385 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 PHACTR2O75167 634 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 SOAT2O75908 522 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 PSMC2P35998 433 aaKnown RBP17.96■□□□□ 0.47
CBWD3-211ENST00000615061 VAMP7P51809 220 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 TRPC3Q13507 836 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 KLHL10Q6JEL2 608 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 GET4Q7L5D6 327 aaPredicted RBP17.96■□□□□ 0.47
CBWD3-211ENST00000615061 ADGRF2Q8IZF7 708 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 THEM5Q8N1Q8 247 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 TOP6BLQ8N6T0 577 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 TMC2Q8TDI7 906 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 MYADMQ96S97 322 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 XYLT2Q9H1B5 865 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 TMLHEQ9NVH6 421 aa17.96■□□□□ 0.47
CBWD3-211ENST00000615061 DDX43Q9NXZ2 648 aaKnown RBP17.96■□□□□ 0.47
CBWD3-211ENST00000615061 PPP1R3GB7ZBB8 358 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 MAPK13O15264 365 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 XYLBO75191 536 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 LRG1P02750 347 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 TWF1Q12792 350 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 WDR72Q3MJ13 1102 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 INTS8Q75QN2 995 aaKnown RBP17.95■□□□□ 0.46
CBWD3-211ENST00000615061 SV2AQ7L0J3 742 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 LIMS2Q7Z4I7 341 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 TDRD5Q8NAT2 981 aaKnown RBP17.95■□□□□ 0.46
CBWD3-211ENST00000615061 KBTBD7Q8WVZ9 684 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 MMS19Q96T76 1030 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 MMRN2Q9H8L6 949 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 KIAA1468Q9P260 1216 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 USTQ9Y2C2 406 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 YIPF1Q9Y548 306 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 ZDBF2Q9HCK1 2354 aa17.95■□□□□ 0.46
CBWD3-211ENST00000615061 CETN3O15182 167 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 CCNE1P24864 410 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 GCLMP48507 274 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 PPP3CAQ08209 521 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 NCOA4Q13772 614 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 ZACNQ401N2 412 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 TMEM86AQ8N2M4 240 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 ST13P5Q8NFI4 369 aaPredicted RBP17.94■□□□□ 0.46
CBWD3-211ENST00000615061 TSG101Q99816 390 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.94■□□□□ 0.46
CBWD3-211ENST00000615061 CEP72Q9P209 647 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 NXF1Q9UBU9 619 aaKnown RBP17.94■□□□□ 0.46
CBWD3-211ENST00000615061 LIMD1Q9UGP4 676 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 NRG2O14511 850 aaPredicted RBP17.94■□□□□ 0.46
CBWD3-211ENST00000615061 GABRDO14764 452 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 PSMA7O14818 248 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 ASGR2P07307 311 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 LMO2P25791 158 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 GBP2P32456 591 aaPredicted RBP17.94■□□□□ 0.46
CBWD3-211ENST00000615061 AP3M2P53677 418 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 STIM1Q13586 685 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 RTL10Q7L3V2 364 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 OTOP3Q7RTS5 596 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 ITFG1Q8TB96 612 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 MRPL45Q9BRJ2 306 aaKnown RBP17.94■□□□□ 0.46
CBWD3-211ENST00000615061 NME7Q9Y5B8 376 aa17.94■□□□□ 0.46
CBWD3-211ENST00000615061 IKBKBO14920 756 aa17.93■□□□□ 0.46
CBWD3-211ENST00000615061 CLSTN1O94985 981 aa17.93■□□□□ 0.46
CBWD3-211ENST00000615061 POU2F2P09086 479 aa17.93■□□□□ 0.46
CBWD3-211ENST00000615061 KRT13P13646 458 aa17.93■□□□□ 0.46
CBWD3-211ENST00000615061 FSHRP23945 695 aa17.93■□□□□ 0.46
CBWD3-211ENST00000615061 LRRC63Q05C16 580 aa17.93■□□□□ 0.46
CBWD3-211ENST00000615061 SLC5A9Q2M3M2 681 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms