RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 CRLF3Q8IUI8 442 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 KCTD6Q8NC69 237 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 TTC25Q96NG3 672 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 PCMTD2Q9NV79 361 aa12.39□□□□□ -0.43
CDH5-208ENST00000614547 DUOX1Q9NRD9 1551 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 RHBDL3P58872 404 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 MED21Q13503 144 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 MAPK6Q16659 721 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 ACSBG2Q5FVE4 666 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 WASHC2DQ5SRD0 308 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 CLNKQ7Z7G1 428 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 TRABD2AQ86V40 505 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 MFN1Q8IWA4 741 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 FAM71DQ8N9W8 422 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 FAF2Q96CS3 445 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 KREMEN1Q96MU8 473 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 MECRQ9BV79 373 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 CADM1Q9BY67 442 aaKnown RBP12.38□□□□□ -0.43
CDH5-208ENST00000614547 SEPT9Q9UHD8 586 aaPredicted RBP12.38□□□□□ -0.43
CDH5-208ENST00000614547 PRR12Q9ULL5 1215 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 IQANK1A0A1B0GTG1 560 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 EIF3DO15371 548 aaKnown RBP eCLIP12.38□□□□□ -0.43
CDH5-208ENST00000614547 ECE1P42892 770 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 CHI3L2Q15782 390 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 MTERF2Q49AM1 385 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 C1orf228Q6PIY5 440 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 GALNT4Q8N4A0 578 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 MORC4Q8TE76 937 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 SEMA4DQ92854 862 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 UTP4Q969X6 686 aaKnown RBP12.38□□□□□ -0.43
CDH5-208ENST00000614547 CRAMP1Q96RY5 1269 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 POLLQ9UGP5 575 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 XPO7Q9UIA9 1087 aaKnown RBP12.38□□□□□ -0.43
CDH5-208ENST00000614547 N4BP2Q86UW6 1770 aaPredicted RBP12.38□□□□□ -0.43
CDH5-208ENST00000614547 WDR64B1ANS9 1081 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 TRIM49D1C9J1S8 452 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 CST8O60676 142 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 ACADSP16219 412 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 GM2AP17900 193 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 SMARCA1P28370 1054 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 SHMT1P34896 483 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 ORC1Q13415 861 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 CYTH1Q15438 398 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 IRGCQ6NXR0 463 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.38□□□□□ -0.43
CDH5-208ENST00000614547 ASAP3Q8TDY4 903 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 AAASQ9NRG9 546 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 OLFML3Q9NRN5 406 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 FAF1Q9UNN5 650 aaPredicted RBP12.38□□□□□ -0.43
CDH5-208ENST00000614547 FIS1Q9Y3D6 152 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 STARD13Q9Y3M8 1113 aa12.38□□□□□ -0.43
CDH5-208ENST00000614547 H0YIN7 160 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 TBX10O75333 385 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 ADRB2P07550 413 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 HNRNPCP07910 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDH5-208ENST00000614547 AMPD1P23109 780 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 RPS6KA3P51812 740 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 NEK3P51956 506 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 AQP5P55064 265 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 GEMIN4P57678 1058 aaKnown RBP12.37□□□□□ -0.43
CDH5-208ENST00000614547 DYNC1I2Q13409 638 aaKnown RBP12.37□□□□□ -0.43
CDH5-208ENST00000614547 AOC3Q16853 763 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 SPDYCQ5MJ68 293 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 MROH9Q5TGP6 573 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 IYDQ6PHW0 289 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 C4orf50Q6ZRC1 276 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 C1orf186Q6ZWK4 172 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 PRR11Q96HE9 360 aaPredicted RBP12.37□□□□□ -0.43
CDH5-208ENST00000614547 SENP7Q9BQF6 1050 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 SEL1LQ9UBV2 794 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 PIK3CDO00329 1044 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 RAB27AP51159 221 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 PDE1BQ01064 536 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 MCL1Q07820 350 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 PRAMEF18Q5VWM3 479 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 SV2AQ7L0J3 742 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 SCUBE1Q8IWY4 988 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 ETNPPLQ8TBG4 499 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 WDR60Q8WVS4 1066 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 LRRC19Q9H756 370 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 PI4KBQ9UBF8 816 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 MYH3P11055 1940 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 NOP56O00567 594 aaKnown RBP12.37□□□□□ -0.43
CDH5-208ENST00000614547 PPEF1O14829 653 aaPredicted RBP12.37□□□□□ -0.43
CDH5-208ENST00000614547 ZMPSTE24O75844 475 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 PTK6Q13882 451 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 LGSNQ5TDP6 509 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 IWS1Q96ST2 819 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 ZNF184Q99676 751 aaPredicted RBP12.37□□□□□ -0.43
CDH5-208ENST00000614547 HERPUD2Q9BSE4 406 aa12.37□□□□□ -0.43
CDH5-208ENST00000614547 MRPL11Q9Y3B7 192 aaKnown RBP12.37□□□□□ -0.43
CDH5-208ENST00000614547 MCF2LO15068 1137 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 EDIL3O43854 480 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 DGKIO75912 1065 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 CRKP46108 304 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 NRLP54845 237 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 TFAMQ00059 246 aaKnown RBP12.36□□□□□ -0.43
CDH5-208ENST00000614547 DSG1Q02413 1049 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 ALCAMQ13740 583 aa12.36□□□□□ -0.43
CDH5-208ENST00000614547 PDCD2Q16342 344 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms