RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 RPGRIP1Q96KN7 1286 aa3.65□□□□□ -1.82
LIG4-205ENST00000614526 MRPL45Q9BRJ2 306 aaKnown RBP3.65□□□□□ -1.82
LIG4-205ENST00000614526 XPNPEP3Q9NQH7 507 aa3.65□□□□□ -1.82
LIG4-205ENST00000614526 CYTH4Q9UIA0 394 aa3.65□□□□□ -1.82
LIG4-205ENST00000614526 NOD1Q9Y239 953 aa3.65□□□□□ -1.82
LIG4-205ENST00000614526 TIMM13Q9Y5L4 95 aaPredicted RBP3.65□□□□□ -1.82
LIG4-205ENST00000614526 CDY2AQ9Y6F7 541 aa3.65□□□□□ -1.82
LIG4-205ENST00000614526 SMIM35A0A1B0GVV1 85 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 H3BQF6 201 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 DAPK3O43293 454 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 IL18RAPO95256 599 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 CYP1A1P04798 512 aaPredicted RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 GHRP10912 638 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 KRT10P13645 584 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 ACAT1P24752 427 aaKnown RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 OAS2P29728 719 aaKnown RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 SP3Q02447 781 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 SOX4Q06945 474 aaPredicted RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 CDO1Q16878 200 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 PTPN20Q4JDL3 420 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 RAB6CQ53S08 254 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 KCNT1Q5JUK3 1230 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 LIN9Q5TKA1 542 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 TXNRD3NBQ6F5E7 133 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 B4GALNT4Q76KP1 1039 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 MON1BQ7L1V2 547 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 HDXQ7Z353 690 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 SLC4A11Q8NBS3 891 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 TMEM35BQ8NCS4 154 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 SMC1BQ8NDV3 1235 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 WHAMMQ8TF30 809 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 HASPINQ8TF76 798 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 MAGOHBQ96A72 148 aaKnown RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 HERPUD2Q9BSE4 406 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 RAB6CQ9H0N0 254 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 DPEP3Q9H4B8 488 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 ZWILCHQ9H900 591 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 SPC25Q9HBM1 224 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 TRMT13Q9NUP7 481 aaKnown RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 PCSK1NQ9UHG2 260 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 COL1A2P08123 1366 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 SMIM28A0A1B0GU29 152 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 MBLAC1A4D2B0 266 aaPredicted RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 I3L4J1 428 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 DUSP11O75319 330 aaKnown RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 RPS6KA5O75582 802 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 HOXD8P13378 290 aaPredicted RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 CYBAP13498 195 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 ATF7P17544 494 aaPredicted RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 LMO2P25791 158 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 ADORA2BP29275 332 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 RFC1P35251 1148 aaPredicted RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 FLT3P36888 993 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 TM4SF4P48230 202 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 PEX5P50542 639 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 AP3M2P53677 418 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 PSMC1P62191 440 aaKnown RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 DYNLT1P63172 113 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 RBP5P82980 135 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 OGDHQ02218 1023 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 CENPCQ03188 943 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 PTPN11Q06124 597 aaPredicted RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 TAF5Q15542 800 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 FAM187BQ17R55 369 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 DNAJC21Q5F1R6 531 aaKnown RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 SEL1L2Q5TEA6 688 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 DNAJC24Q6P3W2 148 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 ANKS1BQ7Z6G8 1248 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 ZNF410Q86VK4 478 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 FAM228AQ86W67 206 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 TSEN2Q8NCE0 465 aaKnown RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 JOSD2Q8TAC2 188 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 UHMK1Q8TAS1 419 aaKnown RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 TMEM176AQ96HP8 235 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 PIWIL1Q96J94 861 aaKnown RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 CPXM1Q96SM3 734 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 NFKBIZQ9BYH8 718 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 MIS12Q9H081 205 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 CENPHQ9H3R5 247 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 ASB7Q9H672 318 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 C10orf88Q9H8K7 445 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 AGO3Q9H9G7 860 aaKnown RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 DNAJC17Q9NVM6 304 aaKnown RBP3.65□□□□□ -1.83
LIG4-205ENST00000614526 ST3GAL5Q9UNP4 418 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 INPP5FQ9Y2H2 1132 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 SNX24Q9Y343 169 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 IPPQ9Y573 584 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 LRRC37A2A6NM11 1700 aa3.65□□□□□ -1.83
LIG4-205ENST00000614526 A8MXQ7 604 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 M0QZ92 97 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 HAS3O00219 553 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 SPTLC1O15269 473 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 ATP2C2O75185 946 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 MICAL2O94851 1124 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 POMCP01189 267 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 RARAP10276 462 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 MMP8P22894 467 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 CD52P31358 61 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 MLH1P40692 756 aa3.64□□□□□ -1.83
LIG4-205ENST00000614526 GRM5P41594 1212 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms