RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.43□□□□□ -0.58
FAM3A-221ENST00000612856 TRPM8Q7Z2W7 1104 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 ACOT1Q86TX2 421 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 ZC3H18Q86VM9 953 aaKnown RBP11.43□□□□□ -0.58
FAM3A-221ENST00000612856 MIB1Q86YT6 1006 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 IRF2BP1Q8IU81 584 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 LRRC34Q8IZ02 419 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 THEM5Q8N1Q8 247 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 SCFD1Q8WVM8 642 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 ADAM33Q9BZ11 813 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 GINM1Q9NU53 330 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 KLHL14Q9P2G3 628 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 ZNF214Q9UL59 606 aaPredicted RBP11.43□□□□□ -0.58
FAM3A-221ENST00000612856 TTC7AQ9ULT0 858 aaPredicted RBP11.43□□□□□ -0.58
FAM3A-221ENST00000612856 CAPN11Q9UMQ6 739 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 A8MUI8 341 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 PDXKO00764 312 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 SOCS7O14512 581 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 PECAM1P16284 738 aaPredicted RBP11.43□□□□□ -0.58
FAM3A-221ENST00000612856 FMO5P49326 533 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 TMEM63BQ5T3F8 832 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 CEP128Q6ZU80 1094 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 SIAH1Q8IUQ4 282 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 DCLK2Q8N568 766 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 IGFLR1Q9H665 355 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 PRMT7Q9NVM4 692 aaPredicted RBP11.43□□□□□ -0.58
FAM3A-221ENST00000612856 ZFATQ9P243 1243 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 PCDHB7Q9Y5E2 793 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 UBE4BO95155 1302 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 IGSF9BQ9UPX0 1349 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 TBKBP1A7MCY6 615 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 UBOX5O94941 541 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 KRT1P04264 644 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 ACO1P21399 889 aaKnown RBP11.43□□□□□ -0.58
FAM3A-221ENST00000612856 RFX8Q6ZV50 586 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 HPDLQ96IR7 371 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 MTMR9Q96QG7 549 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 PABPN1LA6NDY0 278 aaKnown RBP11.43□□□□□ -0.58
FAM3A-221ENST00000612856 CCNE2O96020 404 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 STAG3L1P0CL83 205 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 STX2P32856 288 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 CYP4A22Q5TCH4 519 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 KCTD6Q8NC69 237 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 TMEM35BQ8NCS4 154 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 CCHCR1Q8TD31 782 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 SKA2Q8WVK7 121 aaPredicted RBP11.43□□□□□ -0.58
FAM3A-221ENST00000612856 XPO6Q96QU8 1125 aaKnown RBP11.43□□□□□ -0.58
FAM3A-221ENST00000612856 CELF4Q9BZC1 486 aaKnown RBP11.43□□□□□ -0.58
FAM3A-221ENST00000612856 SSX2IPQ9Y2D8 614 aa11.43□□□□□ -0.58
FAM3A-221ENST00000612856 SGK1O00141 431 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 PRPSAP2O60256 369 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 SETSIPP0DME0 302 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 CD52P31358 61 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 ZBTB16Q05516 673 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 FAM110CQ1W6H9 321 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 PPFIBP2Q8ND30 876 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 ST13P5Q8NFI4 369 aaPredicted RBP11.42□□□□□ -0.58
FAM3A-221ENST00000612856 VPS37BQ9H9H4 285 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 ANKEF1Q9NU02 776 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 RHBDL2Q9NX52 303 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 SOWAHBA6NEL2 793 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 RRN3P2A6NIE6 340 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 TREHO43280 583 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 ASGR1P07306 291 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 PPP4R3CPQ6ZMV5 832 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 CACUL1Q86Y37 369 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 SOCS4Q8WXH5 440 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 POLR3CQ9BUI4 534 aaPredicted RBP11.42□□□□□ -0.58
FAM3A-221ENST00000612856 CCDC88AQ3V6T2 1871 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 EPHB6O15197 1021 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 ENDOD1O94919 500 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 MYL6P60660 151 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 CUL3Q13618 768 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 ALCAMQ13740 583 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 FAM161BQ96MY7 647 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 SNX24Q9Y343 169 aa11.42□□□□□ -0.58
FAM3A-221ENST00000612856 TGFB3P10600 412 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 UCHL3P15374 230 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 KCNA4P22459 653 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 PBX3P40426 434 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 BASP1P80723 227 aaKnown RBP11.41□□□□□ -0.58
FAM3A-221ENST00000612856 BTG3Q14201 252 aaPredicted RBP11.41□□□□□ -0.58
FAM3A-221ENST00000612856 GEN1Q17RS7 908 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 SMTNL2Q2TAL5 461 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 ANKRD20A2Q5SQ80 823 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 ANKRD20A1Q5TYW2 823 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 ANKRD20A3Q5VUR7 823 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 ZNF720Q7Z2F6 126 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 YTHDF3Q7Z739 585 aaKnown RBP11.41□□□□□ -0.58
FAM3A-221ENST00000612856 APPL2Q8NEU8 664 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 SCLYQ96I15 445 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 TEPSINQ96N21 525 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 MTG1Q9BT17 334 aaPredicted RBP11.41□□□□□ -0.58
FAM3A-221ENST00000612856 FGFR1OP2Q9NVK5 253 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 SCOCQ9UIL1 159 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 TSR3Q9UJK0 312 aaKnown RBP11.41□□□□□ -0.58
FAM3A-221ENST00000612856 TRIM33Q9UPN9 1127 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 SH3BP1Q9Y3L3 701 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 IGKV6D-41A0A0C4DH26 115 aa11.41□□□□□ -0.58
FAM3A-221ENST00000612856 DPYSL4O14531 572 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms