RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 C15orf59Q2T9L4 293 aaPredicted RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 IFNL3Q8IZI9 196 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SLC35F6Q8N357 371 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 STKLD1Q8NE28 680 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ENAMQ9NRM1 1142 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 A0A1W2PQ27 194 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 A0A1W2PQ64 194 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 A0A1W2PQD8 194 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CLIC2O15247 247 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SGCEO43556 437 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PLEKHA8P1O95397 391 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 FGFR1P11362 822 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 HSPA2P54652 639 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ZNF483Q8TF39 744 aaPredicted RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 FAM118BQ9BPY3 351 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 APOL5Q9BWW9 433 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 NEK6Q9HC98 313 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 NOVA2Q9UNW9 492 aaKnown RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 IFT52Q9Y366 437 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 HOXC12P31275 282 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RIN1Q13671 783 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TRPV3Q8NET8 790 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TRIT1Q9H3H1 467 aaKnown RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TBC1D22BQ9NU19 505 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SLC39A10Q9ULF5 831 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CLEC4AQ9UMR7 237 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CA5BQ9Y2D0 317 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ZNF208O43345 1280 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MT-ND3P03897 115 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 NUDT17P0C025 328 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ADSLP30566 484 aaPredicted RBP11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 EPS8Q12929 822 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 BRSK2Q8IWQ3 736 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 FANCBQ8NB91 859 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 BRSK1Q8TDC3 778 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GOLPH3LQ9H4A5 285 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 IMPAD1Q9NX62 359 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TNFSF13BQ9Y275 285 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 AXIN2Q9Y2T1 843 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 JRKLQ9Y4A0 524 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PCDHGB3Q9Y5G1 929 aa11.3□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PTCH1Q13635 1447 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ENO1P06733 434 aaKnown RBP11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 LYNP07948 512 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PLCG2P16885 1265 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GUCY1A2P33402 732 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TMED10P49755 219 aaKnown RBP11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PTPN12Q05209 780 aaKnown RBP11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ARHGEF7Q14155 803 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CERKQ8TCT0 537 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PUS7LQ9H0K6 701 aaKnown RBP11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ZCCHC17Q9NP64 241 aaKnown RBP11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 USP17L12C9JPN9 530 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 USP17L21D6R901 530 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 P3H1Q32P28 736 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ZMYM1Q5SVZ6 1142 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ARL8AQ96BM9 186 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 XPO6Q96QU8 1125 aaKnown RBP11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 IGFLR1Q9H665 355 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PRMT8Q9NR22 394 aaPredicted RBP11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 A0A0G2JND7 137 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PIK3R2O00459 728 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PRPSAP2O60256 369 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 LRRN2O75325 713 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 KCNH1O95259 989 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CYBBP04839 570 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 BCAMP50895 628 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 BCAR1P56945 870 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 EFR3AQ14156 821 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 DPP8Q6V1X1 898 aaPredicted RBP11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MCRS1Q96EZ8 462 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 LRWD1Q9UFC0 647 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TNKSO95271 1327 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 E2F8A0AVK6 867 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 FAM92AA1XBS5 289 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 H2AFYO75367 372 aaKnown RBP11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 HSD17B3P37058 310 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MRPS25P82663 173 aaKnown RBP11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TWF1Q12792 350 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 DLGAP5Q15398 846 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 OR5T3Q8NGG3 340 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RAET1EQ8TD07 263 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SGCDQ92629 289 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 JSRP1Q96MG2 331 aaPredicted RBP11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 C19orf44Q9H6X5 657 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GNG13Q9P2W3 67 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GABBR1Q9UBS5 961 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CYTH4Q9UIA0 394 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MYH11P35749 1972 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 KCNJ18B7U540 433 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 M0R3G1 203 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PRKAB2O43741 272 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PPARAQ07869 468 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MTMR3Q13615 1198 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 KCNJ12Q14500 433 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 APOA5Q6Q788 366 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CHRDL2Q6WN34 429 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms