RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 FOXD2O60548 495 aaPredicted RBP11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 PHF2O75151 1096 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 GJB6O95452 261 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 CHRNB2P17787 502 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 RPL17P18621 184 aaKnown RBP11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 DRD4P21917 467 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 HALP42357 657 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 SCTRP47872 440 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 C1orf220Q5T0J3 134 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 AGBL2Q5U5Z8 902 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 STXBP4Q6ZWJ1 553 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 HAUS6Q7Z4H7 955 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 KCNK9Q9NPC2 374 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 KCND2Q9NZV8 630 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 TCEAL9Q9UHQ7 104 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 EFR3BQ9Y2G0 817 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 TELO2Q9Y4R8 837 aa11.32□□□□□ -0.6
PCDHGC3-202ENST00000611950 DHX15O43143 795 aaKnown RBP11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 SGTAO43765 313 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 MUTP22033 750 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 CHKAP35790 457 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 PTGIRP43119 386 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 MTM1Q13496 603 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 HIBCHQ6NVY1 386 aaPredicted RBP11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 SULF1Q8IWU6 871 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 CPA5Q8WXQ8 436 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 MAML3Q96JK9 1138 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 HERPUD2Q9BSE4 406 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 ADAM7Q9H2U9 754 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 CHST7Q9NS84 486 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 GGA3Q9NZ52 723 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 LARSQ9P2J5 1176 aaKnown RBP11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 RASAL2Q9UJF2 1139 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 CARD8Q9Y2G2 431 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 ARIH1Q9Y4X5 557 aaPredicted RBP11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 FAM155AB1AL88 458 aaPredicted RBP11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 BHMG1C9JSJ3 638 aaPredicted RBP11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 PLA2G6O60733 806 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 CSPG5O95196 566 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 GH1P01241 217 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 RRM1P23921 792 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 CAP2P40123 477 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 HSD17B4P51659 736 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 KIF22Q14807 665 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 TBC1D1Q86TI0 1168 aaPredicted RBP11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 CHCHD4Q8N4Q1 142 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 TAS1R2Q8TE23 839 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 NR1H4Q96RI1 486 aaPredicted RBP11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 RIT2Q99578 217 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 NRDE2Q9H7Z3 1164 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 EHMT1Q9H9B1 1298 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 ATXN10Q9UBB4 475 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 BAIAP2L1Q9UHR4 511 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 PSME4Q14997 1843 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 FAM25EA8MYX2 175 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 ATP9AO75110 1047 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 CLTAP09496 248 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 CETN1Q12798 172 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 XKR9Q5GH70 373 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 CYB5D1Q6P9G0 228 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 RNF207Q6ZRF8 634 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 FAM160B2Q86V87 743 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 SLC9A9Q8IVB4 645 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 XXYLT1Q8NBI6 393 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 SH3TC2Q8TF17 1288 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 CLEC4DQ8WXI8 215 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 NAP1L3Q99457 506 aaPredicted RBP11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 RAVER2Q9HCJ3 691 aaKnown RBP11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 ABCF3Q9NUQ8 709 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 RNF186Q9NXI6 227 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 ANAPC7Q9UJX3 599 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 FEM1BQ9UK73 627 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 USTQ9Y2C2 406 aa11.31□□□□□ -0.6
PCDHGC3-202ENST00000611950 SYNGAP1Q96PV0 1343 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 PABPN1LA6NDY0 278 aaKnown RBP11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 RASGRF2O14827 1237 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 RPS12P25398 132 aaKnown RBP11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 RARRES1P49788 294 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 FMO1Q01740 532 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 KRT17Q04695 432 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 RASA2Q15283 850 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 KYNUQ16719 465 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 ERMARDQ5T6L9 678 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 RSPH3Q86UC2 560 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 RHOT2Q8IXI1 618 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 TAB3Q8N5C8 712 aaPredicted RBP11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 ESX1Q8N693 406 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 SEC14L1Q92503 715 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 TLCD1Q96CP7 247 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 SNX27Q96L92 541 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 TXLNGYQ9BZA5 131 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 FAM129AQ9BZQ8 928 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 AS3MTQ9HBK9 375 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 HESX1Q9UBX0 185 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 MTRF1LQ9UGC7 380 aaKnown RBP11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 ASTN2O75129 1339 aaPredicted RBP11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 RIPK2O43353 540 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 STAM2O75886 525 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 PIAS1O75925 651 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 ICAM1P05362 532 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms