RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 APPL2Q8NEU8 664 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 CXorf38Q8TB03 319 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 BORCS6Q96GS4 357 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 SENP8Q96LD8 212 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 CRISPLD1Q9H336 500 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 EXOC7Q9UPT5 735 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 C2CD2Q9Y426 696 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 NFE2L3Q9Y4A8 694 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 GREB1Q4ZG55 1949 aa12.45□□□□□ -0.42
LINC00539-204ENST00000608957 ZNF638Q14966 1978 aaKnown RBP12.44□□□□□ -0.42
LINC00539-204ENST00000608957 BICDL2A1A5D9 508 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 ANHXE9PGG2 379 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 TGFB1I1O43294 461 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 KIF20AO95235 890 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 CCNE1P24864 410 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 POU5F1Q01860 360 aaKnown RBP12.44□□□□□ -0.42
LINC00539-204ENST00000608957 YWHAHQ04917 246 aaPredicted RBP12.44□□□□□ -0.42
LINC00539-204ENST00000608957 ADCY1Q08828 1119 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 CCDC173Q0VFZ6 552 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 TDGQ13569 410 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 HTR4Q13639 388 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 TPD52L1Q16890 204 aaPredicted RBP12.44□□□□□ -0.42
LINC00539-204ENST00000608957 DSTYKQ6XUX3 929 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 TCEAL8Q8IYN2 117 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 SYCP3Q8IZU3 236 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 FBXL6Q8N531 539 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 ZNF507Q8TCN5 953 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 ING5Q8WYH8 240 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 RTP3Q9BQQ7 232 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 RPP25Q9BUL9 199 aaKnown RBP12.44□□□□□ -0.42
LINC00539-204ENST00000608957 HSD3B7Q9H2F3 369 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 CYP4F11Q9HBI6 524 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 FANCLQ9NW38 375 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 DPP3Q9NY33 737 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 AFF4Q9UHB7 1163 aaKnown RBP12.44□□□□□ -0.42
LINC00539-204ENST00000608957 POLIQ9UNA4 740 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 DUSP12Q9UNI6 340 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 ARIH1Q9Y4X5 557 aaPredicted RBP12.44□□□□□ -0.42
LINC00539-204ENST00000608957 INSL5Q9Y5Q6 135 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 COL4A2P08572 1712 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 MIA3Q5JRA6 1907 aa12.44□□□□□ -0.42
LINC00539-204ENST00000608957 NUP210Q8TEM1 1887 aaPredicted RBP12.44□□□□□ -0.42
LINC00539-204ENST00000608957 UBE4BO95155 1302 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 PTPRJQ12913 1337 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 TRIM49BA6NDI0 452 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 EIF3DO15371 548 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC00539-204ENST00000608957 AP5Z1O43299 807 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 EXTL3O43909 919 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 XYLBO75191 536 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 IL18RAPO95256 599 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 ADCY5O95622 1261 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 CYP11A1P05108 521 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 RHOP08100 348 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 ZNF18P17022 549 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 TYMPP19971 482 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 PLA2G5P39877 138 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 CCR2P41597 374 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 PMS1P54277 932 aaKnown RBP12.43□□□□□ -0.42
LINC00539-204ENST00000608957 BMT2Q1RMZ1 405 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 TPGS2Q68CL5 300 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 LMBRD2Q68DH5 695 aaPredicted RBP12.43□□□□□ -0.42
LINC00539-204ENST00000608957 TTI2Q6NXR4 508 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 ARMCX5Q6P1M9 558 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 FOXR2Q6PJQ5 311 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 PARM1Q6UWI2 310 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 RTL10Q7L3V2 364 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 HS6ST3Q8IZP7 471 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 SLC44A3Q8N4M1 653 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 TTC9BQ8N6N2 239 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 C1orf127Q8N9H9 656 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 PRSS33Q8NF86 280 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 OR10T2Q8NGX3 314 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 SCFD1Q8WVM8 642 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 FGF13Q92913 245 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 FGF14Q92915 247 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 TCEAL4Q96EI5 215 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 MFSD14AQ96MC6 490 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 PGLYRP2Q96PD5 576 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 TMEM206Q9H813 350 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 PDE11AQ9HCR9 933 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC00539-204ENST00000608957 CEP72Q9P209 647 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 IGSF9Q9P2J2 1179 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 CDH7Q9ULB5 785 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.43□□□□□ -0.42
LINC00539-204ENST00000608957 WDFY4Q6ZS81 3184 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 TICRRQ7Z2Z1 1910 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 ANAPC1Q9H1A4 1944 aa12.43□□□□□ -0.42
LINC00539-204ENST00000608957 KIF26AQ9ULI4 1882 aaPredicted RBP12.42□□□□□ -0.42
LINC00539-204ENST00000608957 PRRG1O14668 218 aa12.42□□□□□ -0.42
LINC00539-204ENST00000608957 MOSPD3O75425 235 aa12.42□□□□□ -0.42
LINC00539-204ENST00000608957 LDHAP00338 332 aaKnown RBP12.42□□□□□ -0.42
LINC00539-204ENST00000608957 ATP1A3P13637 1013 aa12.42□□□□□ -0.42
LINC00539-204ENST00000608957 CPB1P15086 417 aa12.42□□□□□ -0.42
LINC00539-204ENST00000608957 NPR3P17342 541 aa12.42□□□□□ -0.42
LINC00539-204ENST00000608957 CEBPBP17676 345 aa12.42□□□□□ -0.42
LINC00539-204ENST00000608957 TAF6P49848 677 aa12.42□□□□□ -0.42
LINC00539-204ENST00000608957 CDR1P51861 262 aa12.42□□□□□ -0.42
LINC00539-204ENST00000608957 LRRC63Q05C16 580 aa12.42□□□□□ -0.42
LINC00539-204ENST00000608957 PABPC1LQ4VXU2 614 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms