RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 TUFMP49411 452 aaKnown RBP16.09■□□□□ 0.17
CTSA-216ENST00000607212 AARSP49588 968 aaKnown RBP eCLIP16.09■□□□□ 0.17
CTSA-216ENST00000607212 ACOT2P49753 483 aa16.09■□□□□ 0.17
CTSA-216ENST00000607212 CYP4F8P98187 520 aa16.09■□□□□ 0.17
CTSA-216ENST00000607212 KARSQ15046 597 aaKnown RBP16.09■□□□□ 0.17
CTSA-216ENST00000607212 ZBTB6Q15916 424 aa16.09■□□□□ 0.17
CTSA-216ENST00000607212 ARHGAP29Q52LW3 1261 aa16.09■□□□□ 0.17
CTSA-216ENST00000607212 C9orf57Q5W0N0 161 aa16.09■□□□□ 0.17
CTSA-216ENST00000607212 CEP68Q76N32 757 aa16.09■□□□□ 0.17
CTSA-216ENST00000607212 CELF5Q8N6W0 485 aaKnown RBP16.09■□□□□ 0.17
CTSA-216ENST00000607212 GIPC2Q8TF65 315 aa16.09■□□□□ 0.17
CTSA-216ENST00000607212 RAD54LQ92698 747 aa16.09■□□□□ 0.17
CTSA-216ENST00000607212 NELL1Q92832 810 aa16.09■□□□□ 0.17
CTSA-216ENST00000607212 PSMG2Q969U7 264 aa16.09■□□□□ 0.17
CTSA-216ENST00000607212 RSPRY1Q96DX4 576 aa16.09■□□□□ 0.17
CTSA-216ENST00000607212 TMX3Q96JJ7 454 aa16.09■□□□□ 0.17
CTSA-216ENST00000607212 UPF2Q9HAU5 1272 aaKnown RBP16.09■□□□□ 0.17
CTSA-216ENST00000607212 DSEQ9UL01 958 aa16.09■□□□□ 0.17
CTSA-216ENST00000607212 NCANO14594 1321 aa16.09■□□□□ 0.17
CTSA-216ENST00000607212 TSC2P49815 1807 aa16.08■□□□□ 0.17
CTSA-216ENST00000607212 SPECC1L-ADORA2AF8WAN1 911 aa16.08■□□□□ 0.16
CTSA-216ENST00000607212 CYB561D2O14569 222 aa16.08■□□□□ 0.16
CTSA-216ENST00000607212 CDC25CP30307 473 aa16.08■□□□□ 0.16
CTSA-216ENST00000607212 ABCD1P33897 745 aa16.08■□□□□ 0.16
CTSA-216ENST00000607212 TAF6P49848 677 aa16.08■□□□□ 0.16
CTSA-216ENST00000607212 ATXN1P54253 815 aaKnown RBP16.08■□□□□ 0.16
CTSA-216ENST00000607212 PON2Q15165 354 aa16.08■□□□□ 0.16
CTSA-216ENST00000607212 DGKKQ5KSL6 1271 aa16.08■□□□□ 0.16
CTSA-216ENST00000607212 LARP1BQ659C4 914 aaKnown RBP16.08■□□□□ 0.16
CTSA-216ENST00000607212 LAIR1Q6GTX8 287 aa16.08■□□□□ 0.16
CTSA-216ENST00000607212 SPEM1Q8N4L4 309 aa16.08■□□□□ 0.16
CTSA-216ENST00000607212 KRI1Q8N9T8 703 aaKnown RBP16.08■□□□□ 0.16
CTSA-216ENST00000607212 OR10T2Q8NGX3 314 aa16.08■□□□□ 0.16
CTSA-216ENST00000607212 NOC3LQ8WTT2 800 aaKnown RBP16.08■□□□□ 0.16
CTSA-216ENST00000607212 LRRC3Q9BY71 257 aa16.08■□□□□ 0.16
CTSA-216ENST00000607212 THG1LQ9NWX6 298 aaKnown RBP16.08■□□□□ 0.16
CTSA-216ENST00000607212 ABI2Q9NYB9 513 aaPredicted RBP16.08■□□□□ 0.16
CTSA-216ENST00000607212 GTSE1Q9NYZ3 720 aa16.08■□□□□ 0.16
CTSA-216ENST00000607212 CPSF3Q9UKF6 684 aaKnown RBP16.08■□□□□ 0.16
CTSA-216ENST00000607212 SCN1AP35498 2009 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 ZNF292O60281 2723 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 A0A0B4J269 797 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 DCDC2BA2VCK2 349 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 BMP15O95972 392 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 PIGRP01833 764 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 PAX3P23760 479 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 CTHP32929 405 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 C8orf34Q49A92 452 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 ZC2HC1CQ53FD0 456 aaPredicted RBP16.07■□□□□ 0.16
CTSA-216ENST00000607212 SLFN12LQ6IEE8 588 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 Q6ZS52 159 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 GAREM2Q75VX8 874 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 RALGPS2Q86X27 583 aaPredicted RBP16.07■□□□□ 0.16
CTSA-216ENST00000607212 ZNF687Q8N1G0 1237 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 TTC16Q8NEE8 873 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 BPIFB1Q8TDL5 484 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 POMGNT1Q8WZA1 660 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 LARP4BQ92615 738 aaKnown RBP16.07■□□□□ 0.16
CTSA-216ENST00000607212 SMG9Q9H0W8 520 aaKnown RBP16.07■□□□□ 0.16
CTSA-216ENST00000607212 TASP1Q9H6P5 420 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 DPP3Q9NY33 737 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 AGO2Q9UKV8 859 aaKnown RBP16.07■□□□□ 0.16
CTSA-216ENST00000607212 DERAQ9Y315 318 aa16.07■□□□□ 0.16
CTSA-216ENST00000607212 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.07■□□□□ 0.16
CTSA-216ENST00000607212 GPR179Q6PRD1 2367 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 ANKRD63C9JTQ0 380 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 LONP1P36776 959 aaKnown RBP16.06■□□□□ 0.16
CTSA-216ENST00000607212 PLCB2Q00722 1185 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 DMWDQ09019 674 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 FCHO2Q0JRZ9 810 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 BFSP1Q12934 665 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 PTPAQ15257 358 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 SLC39A4Q6P5W5 647 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 DYMQ7RTS9 669 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 DCP1BQ8IZD4 617 aaKnown RBP16.06■□□□□ 0.16
CTSA-216ENST00000607212 ZNF560Q96MR9 790 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 RTKNQ9BST9 563 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 ZCWPW1Q9H0M4 648 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 ASB7Q9H672 318 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 PARD6AQ9NPB6 346 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 BLOC1S4Q9NUP1 217 aa16.06■□□□□ 0.16
CTSA-216ENST00000607212 MAGED2Q9UNF1 606 aaPredicted RBP16.06■□□□□ 0.16
CTSA-216ENST00000607212 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.06■□□□□ 0.16
CTSA-216ENST00000607212 CEP250Q9BV73 2442 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.05■□□□□ 0.16
CTSA-216ENST00000607212 MYBPHLA2RUH7 354 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 VPS37CA5D8V6 355 aaPredicted RBP16.05■□□□□ 0.16
CTSA-216ENST00000607212 TISP43B9A030 160 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 ARNTLO00327 626 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 PIRO00625 290 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 FAM189A1O60320 539 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 PRAMEF12O95522 483 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 RETP07949 1114 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 TDGF1P13385 188 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 AVPR1AP37288 418 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 MCM2P49736 904 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 ZNF131P52739 623 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 MLLT6P55198 1093 aaPredicted RBP16.05■□□□□ 0.16
CTSA-216ENST00000607212 TSPY1Q01534 308 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 TNK2Q07912 1038 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms