RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 NOLC1Q14978 699 aaKnown RBP eCLIP16.29■□□□□ 0.2
SSBP4-214ENST00000607020 SAFBQ15424 915 aaKnown RBP eCLIP16.29■□□□□ 0.2
SSBP4-214ENST00000607020 PSAPL1Q6NUJ1 521 aa16.29■□□□□ 0.2
SSBP4-214ENST00000607020 UNQ6494/PRO21346Q6UXR6 183 aa16.29■□□□□ 0.2
SSBP4-214ENST00000607020 C1orf186Q6ZWK4 172 aa16.29■□□□□ 0.2
SSBP4-214ENST00000607020 DUSP15Q9H1R2 295 aaPredicted RBP16.29■□□□□ 0.2
SSBP4-214ENST00000607020 DDX19AQ9NUU7 478 aaKnown RBP16.29■□□□□ 0.2
SSBP4-214ENST00000607020 LRWD1Q9UFC0 647 aa16.29■□□□□ 0.2
SSBP4-214ENST00000607020 ZMIZ1Q9ULJ6 1067 aa16.29■□□□□ 0.2
SSBP4-214ENST00000607020 UBQLN1Q9UMX0 589 aaKnown RBP16.29■□□□□ 0.2
SSBP4-214ENST00000607020 DNM3Q9UQ16 869 aa16.29■□□□□ 0.2
SSBP4-214ENST00000607020 SDK1Q7Z5N4 2213 aa16.29■□□□□ 0.2
SSBP4-214ENST00000607020 TMEM8BA6NDV4 472 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 SOBPA7XYQ1 873 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 C1QTNF9BB2RNN3 333 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 SLC16A4O15374 487 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 JAK2O60674 1132 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 LARGE1O95461 756 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 ADRB2P07550 413 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 C1QTNF9P0C862 333 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 AMPD2Q01433 879 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 STRN3Q13033 797 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 RUNX3Q13761 415 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 C8orf34Q49A92 452 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 FBXO43Q4G163 708 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 OVOS1Q6IE37 1185 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 RINT1Q6NUQ1 792 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 DSTYKQ6XUX3 929 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 IGSF22Q8N9C0 903 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 KCNN1Q92952 543 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 CHFRQ96EP1 664 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 TMEM121BQ9BXQ6 578 aaPredicted RBP16.28■□□□□ 0.2
SSBP4-214ENST00000607020 SLC46A2Q9BY10 475 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 FOXP1Q9H334 677 aaPredicted RBP16.28■□□□□ 0.2
SSBP4-214ENST00000607020 SMOC1Q9H4F8 434 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 EBF1Q9UH73 591 aa16.28■□□□□ 0.2
SSBP4-214ENST00000607020 BCLAF3A2AJT9 711 aaKnown RBP16.27■□□□□ 0.2
SSBP4-214ENST00000607020 CLDN3O15551 220 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 RHOBTB1O94844 696 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 CYP11A1P05108 521 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 CXCL8P10145 99 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 HARSP12081 509 aaKnown RBP16.27■□□□□ 0.2
SSBP4-214ENST00000607020 DRD1P21728 446 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 GUCY2CP25092 1073 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 TRAPPC10P48553 1259 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 COL9A2Q14055 689 aaPredicted RBP16.27■□□□□ 0.2
SSBP4-214ENST00000607020 SEZ6Q53EL9 994 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 ARMCX5Q6P1M9 558 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 CMTM8Q8IZV2 173 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 TTC9BQ8N6N2 239 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 TMEM161BQ8NDZ6 487 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 KIF12Q96FN5 646 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 RUSC1Q9BVN2 902 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 HPS4Q9NQG7 708 aa16.27■□□□□ 0.2
SSBP4-214ENST00000607020 TICRRQ7Z2Z1 1910 aa16.27■□□□□ 0.19
SSBP4-214ENST00000607020 ZFYVE26Q68DK2 2539 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 ZZEF1O43149 2961 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 OTOL1A6NHN0 477 aaPredicted RBP16.26■□□□□ 0.19
SSBP4-214ENST00000607020 C4orf47A7E2U8 309 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 E9PMD0 336 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 XPOTO43592 962 aaKnown RBP16.26■□□□□ 0.19
SSBP4-214ENST00000607020 CAVIN2O95810 425 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 MAPTP10636 758 aaKnown RBP16.26■□□□□ 0.19
SSBP4-214ENST00000607020 NOVA1P51513 510 aaKnown RBP16.26■□□□□ 0.19
SSBP4-214ENST00000607020 LILRA4P59901 499 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 SMARCB1Q12824 385 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 VEPH1Q14D04 833 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 KARSQ15046 597 aaKnown RBP16.26■□□□□ 0.19
SSBP4-214ENST00000607020 ELF2Q15723 593 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 KYAT1Q16773 422 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 TTC38Q5R3I4 469 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 DAB2IPQ5VWQ8 1189 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 SYT13Q7L8C5 426 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 TMEM130Q8N3G9 435 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 EDEM2Q9BV94 578 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 TBX20Q9UMR3 447 aa16.26■□□□□ 0.19
SSBP4-214ENST00000607020 RNF40O75150 1001 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 SOAT2O75908 522 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 SEC24BO95487 1268 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 CEACAM1P13688 526 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 PLS3P13797 630 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 CSRP1P21291 193 aaKnown RBP16.25■□□□□ 0.19
SSBP4-214ENST00000607020 DDX6P26196 483 aaKnown RBP eCLIP16.25■□□□□ 0.191e-6■■■■□ 24.4
SSBP4-214ENST00000607020 GALK1P51570 392 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 SMTNP53814 917 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 CYP4F8P98187 520 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 SPATA1Q5VX52 437 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 TCEAL6Q6IPX3 200 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 KCTD17Q8N5Z5 321 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 SNX29Q8TEQ0 813 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 C2orf15Q8WU43 125 aaKnown RBP16.25■□□□□ 0.19
SSBP4-214ENST00000607020 TCEAL3Q969E4 200 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 EXOC4Q96A65 974 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 SENP8Q96LD8 212 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 GCNAQ96QF7 691 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 LPIN3Q9BQK8 851 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 RAB34Q9BZG1 259 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 HAPLN2Q9GZV7 340 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 ZCWPW1Q9H0M4 648 aa16.25■□□□□ 0.19
SSBP4-214ENST00000607020 KIF9Q9HAQ2 790 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms