RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 MTA2O94776 668 aa20.4■□□□□ 0.86
TUBB4B-202ENST00000604929 GJB6O95452 261 aa20.4■□□□□ 0.86
TUBB4B-202ENST00000604929 STAU1O95793 577 aaKnown RBP20.4■□□□□ 0.86
TUBB4B-202ENST00000604929 ITGA4P13612 1032 aa20.4■□□□□ 0.86
TUBB4B-202ENST00000604929 MRPS25P82663 173 aaKnown RBP20.4■□□□□ 0.86
TUBB4B-202ENST00000604929 PTPN11Q06124 597 aaPredicted RBP20.4■□□□□ 0.86
TUBB4B-202ENST00000604929 PAK2Q13177 524 aa20.4■□□□□ 0.86
TUBB4B-202ENST00000604929 LPIN1Q14693 890 aa20.4■□□□□ 0.86
TUBB4B-202ENST00000604929 PHF13Q86YI8 300 aaPredicted RBP20.4■□□□□ 0.86
TUBB4B-202ENST00000604929 RNF169Q8NCN4 708 aa20.4■□□□□ 0.86
TUBB4B-202ENST00000604929 TMEM35BQ8NCS4 154 aa20.4■□□□□ 0.86
TUBB4B-202ENST00000604929 PIRO00625 290 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 PTGESO14684 152 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 DDX3YO15523 660 aaKnown RBP20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 MGEA5O60502 916 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 CD4P01730 458 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 PAEPP09466 180 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 MYBL1P10243 752 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 MLH1P40692 756 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 PTP4A2Q12974 167 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 LIN9Q5TKA1 542 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 C11orf63Q6NUN7 778 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 C12orf29Q8N999 325 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 TRIM11Q96F44 468 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 RPGRIP1Q96KN7 1286 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 GAD1Q99259 594 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 SAGE1Q9NXZ1 904 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 CACNG4Q9UBN1 327 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 PCDHGC3Q9UN70 934 aa20.39■□□□□ 0.86
TUBB4B-202ENST00000604929 SPTLC1O15269 473 aa20.39■□□□□ 0.85
TUBB4B-202ENST00000604929 RPLP2P05387 115 aaKnown RBP20.39■□□□□ 0.85
TUBB4B-202ENST00000604929 MMP8P22894 467 aa20.39■□□□□ 0.85
TUBB4B-202ENST00000604929 TRIM71Q2Q1W2 868 aaKnown RBP20.39■□□□□ 0.85
TUBB4B-202ENST00000604929 PDCL2Q8N4E4 241 aa20.39■□□□□ 0.85
TUBB4B-202ENST00000604929 LRRC52Q8N7C0 313 aa20.39■□□□□ 0.85
TUBB4B-202ENST00000604929 PBKQ96KB5 322 aa20.39■□□□□ 0.85
TUBB4B-202ENST00000604929 PNKPQ96T60 521 aa20.39■□□□□ 0.85
TUBB4B-202ENST00000604929 TSEN34Q9BSV6 310 aaKnown RBP20.39■□□□□ 0.85
TUBB4B-202ENST00000604929 SELENOOQ9BVL4 669 aa20.39■□□□□ 0.85
TUBB4B-202ENST00000604929 ERVK-5Q9HDB9 667 aa20.39■□□□□ 0.85
TUBB4B-202ENST00000604929 RBM12Q9NTZ6 932 aaKnown RBP20.39■□□□□ 0.85
TUBB4B-202ENST00000604929 MED7O43513 233 aa20.38■□□□□ 0.85
TUBB4B-202ENST00000604929 IGFBP6P24592 240 aaPredicted RBP20.38■□□□□ 0.85
TUBB4B-202ENST00000604929 PRMT2P55345 433 aa20.38■□□□□ 0.85
TUBB4B-202ENST00000604929 MAMLD1Q13495 774 aa20.38■□□□□ 0.85
TUBB4B-202ENST00000604929 ERICH1Q86X53 443 aa20.38■□□□□ 0.85
TUBB4B-202ENST00000604929 GSTCDQ8NEC7 633 aa20.38■□□□□ 0.85
TUBB4B-202ENST00000604929 KRT35Q92764 455 aa20.38■□□□□ 0.85
TUBB4B-202ENST00000604929 CALR3Q96L12 384 aaKnown RBP20.38■□□□□ 0.85
TUBB4B-202ENST00000604929 NT5C1AQ9BXI3 368 aa20.38■□□□□ 0.85
TUBB4B-202ENST00000604929 UNC93B1Q9H1C4 597 aa20.38■□□□□ 0.85
TUBB4B-202ENST00000604929 AVENQ9NQS1 362 aaPredicted RBP20.38■□□□□ 0.85
TUBB4B-202ENST00000604929 MIOSQ9NXC5 875 aa20.38■□□□□ 0.85
TUBB4B-202ENST00000604929 RNF14Q9UBS8 474 aa20.38■□□□□ 0.85
TUBB4B-202ENST00000604929 CEP83Q9Y592 693 aa20.38■□□□□ 0.85
TUBB4B-202ENST00000604929 KPNA7A9QM74 516 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 XPOTO43592 962 aaKnown RBP20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 SPOPO43791 374 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 LSM8O95777 96 aaKnown RBP20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 CKBP12277 381 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 ATF7P17544 494 aaPredicted RBP20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 MARCKSL1P49006 195 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 TUBB4BP68371 445 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 C1QBPQ07021 282 aaKnown RBP20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 INCA1Q0VD86 236 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 ZNF211Q13398 564 aaPredicted RBP20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 SOWAHAQ2M3V2 549 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 CYP4A22Q5TCH4 519 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 OR6B3Q8NGW1 331 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 UBA3Q8TBC4 463 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 ALG3Q92685 438 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 VCPIP1Q96JH7 1222 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.37■□□□□ 0.859e-7■■■■□ 21.6
TUBB4B-202ENST00000604929 CYTH4Q9UIA0 394 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 MYO1FO00160 1098 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 HCRTO43612 131 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 DCAF12L1Q5VU92 463 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 DAB2IPQ5VWQ8 1189 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 ZNF572Q7Z3I7 529 aaPredicted RBP20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 ACOT1Q86TX2 421 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 ADAM2Q99965 735 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 BEGAINQ9BUH8 593 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 TJP2Q9UDY2 1190 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 NME7Q9Y5B8 376 aa20.37■□□□□ 0.85
TUBB4B-202ENST00000604929 RALGAPA2Q2PPJ7 1873 aa20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 MICAL2O94851 1124 aa20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 H2AFXP16104 143 aaPredicted RBP20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 AADACL2Q6P093 401 aa20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 AGMOQ6ZNB7 445 aa20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 PPP1R10Q96QC0 940 aaKnown RBP20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 RPS6KC1Q96S38 1066 aa20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 LPIN3Q9BQK8 851 aa20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 AP1M1Q9BXS5 423 aa20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 ZNF518BQ9C0D4 1074 aa20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 ARL5CA6NH57 179 aa20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 PDGFRBP09619 1106 aa20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 VDRP11473 427 aa20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 RPL7AP62424 266 aaKnown RBP20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 MTFR1Q15390 333 aa20.36■□□□□ 0.85
TUBB4B-202ENST00000604929 SGO2Q562F6 1265 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms