RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 KRT71Q3SY84 523 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 BMP2KLQ5H9B9 411 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 KLHDC7AQ5VTJ3 777 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 PIWIL3Q7Z3Z3 882 aaKnown RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 RALYLQ86SE5 291 aaKnown RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 ZGPATQ8N5A5 531 aaKnown RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 CCDC155Q8N6L0 562 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 FBXO15Q8NCQ5 510 aaPredicted RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 DENND1AQ8TEH3 1009 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 RUBCNQ92622 972 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 ZNF653Q96CK0 615 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 AIFM3Q96NN9 605 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 DDX50Q9BQ39 737 aaKnown RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 SLC52A2Q9HAB3 445 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 ATP13A1Q9HD20 1204 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 ARHGEF4Q9NR80 690 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 ZNF277Q9NRM2 450 aaPredicted RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 ARHGAP26Q9UNA1 814 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 SH3GLB1Q9Y371 365 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 TRPM1Q7Z4N2 1603 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 NRXN3Q9Y4C0 1643 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 ABCC11Q96J66 1382 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 MYPNQ86TC9 1320 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 GOLGA6L7A0A1B0GV03 622 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 LRRIQ3A6PVS8 624 aaPredicted RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 ACKR2O00590 384 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 IKBKBO14920 756 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 NPC1O15118 1278 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 MX1P20591 662 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 CDH3P22223 829 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 MLH1P40692 756 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 IFNAR2P48551 515 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 PEX5P50542 639 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 PSMC6P62333 389 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 CLCQ05315 142 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 DHX9Q08211 1270 aaKnown RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 WHAMMP3Q1A5X7 153 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 CORO6Q6QEF8 472 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 CCDC121Q6ZUS5 278 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 NLRC3Q7RTR2 1065 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 FAM228AQ86W67 206 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 OSTM1Q86WC4 334 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 MEIOBQ8N635 442 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 TRPC4APQ8TEL6 797 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 ATP6V0A1Q93050 837 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 PRICKLE1Q96MT3 831 aaPredicted RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 NR1H4Q96RI1 486 aaPredicted RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 CTAGE1Q96RT6 745 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 RSRP1Q9BUV0 290 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 EIF2AQ9BY44 585 aaKnown RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 GBP3Q9H0R5 595 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 MS4A5Q9H3V2 200 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 PLEKHA4Q9H4M7 779 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 TRIM39Q9HCM9 518 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 PREBQ9HCU5 417 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 SLC40A1Q9NP59 571 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 GPR108Q9NPR9 543 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 INTS10Q9NVR2 710 aaKnown RBP5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 PGPEP1Q9NXJ5 209 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 ASB3Q9Y575 518 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 SESN1Q9Y6P5 492 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 WDR90Q96KV7 1748 aa5.33□□□□□ -1.56
SPTBN1-206ENST00000602898 AP3D1O14617 1153 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 FOXO3O43524 673 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 PGM3O95394 542 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 F13A1P00488 732 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 SERPINC1P01008 464 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 IGFBP4P22692 258 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 VEGFBP49765 207 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 PMS2P54278 862 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 PLTPP55058 493 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 CYP4F8P98187 520 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 PMS2P11Q13670 270 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 LRRFIP1Q32MZ4 808 aaKnown RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 CFAP157Q5JU67 520 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 KRBOX4Q5JUW0 171 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 BEND6Q5SZJ8 279 aaPredicted RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 NEK5Q6P3R8 708 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 FAM173BQ6P4H8 233 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 CRELD2Q6UXH1 353 aaPredicted RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 Q6ZVU0 165 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 TTC6Q86TZ1 520 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 PLA2G4DQ86XP0 818 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 SYT2Q8N9I0 419 aaPredicted RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 LRRN4CLQ8ND94 238 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 C3orf58Q8NDZ4 430 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 CACTINQ8WUQ7 758 aaKnown RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 BTN2A2Q8WVV5 523 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 RIN2Q8WYP3 895 aaPredicted RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 VPS50Q96JG6 964 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 CGREF1Q99674 301 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 UQCC2Q9BRT2 126 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 NOC4LQ9BVI4 516 aaKnown RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 B3GNT5Q9BYG0 378 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 FAM204AQ9H8W3 233 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 ACTR5Q9H9F9 607 aaPredicted RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 C1orf112Q9NSG2 853 aa5.32□□□□□ -1.56
SPTBN1-206ENST00000602898 GGA2Q9UJY4 613 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms