RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 KCNA2P16389 499 aa9.09□□□□□ -0.96
CSMD1-216ENST00000602557 PWP1Q13610 501 aa9.09□□□□□ -0.96
CSMD1-216ENST00000602557 PTK2BQ14289 1009 aa9.09□□□□□ -0.96
CSMD1-216ENST00000602557 GRM4Q14833 912 aa9.09□□□□□ -0.96
CSMD1-216ENST00000602557 DALRD3Q5D0E6 543 aaKnown RBP9.09□□□□□ -0.96
CSMD1-216ENST00000602557 ARMC4Q5T2S8 1044 aa9.09□□□□□ -0.96
CSMD1-216ENST00000602557 ZNF554Q86TJ5 538 aa9.09□□□□□ -0.96
CSMD1-216ENST00000602557 HEY2Q9UBP5 337 aa9.09□□□□□ -0.96
CSMD1-216ENST00000602557 ZNF521Q96K83 1311 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 RNF103O00237 685 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 LDHAP00338 332 aaKnown RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 HSMCR30P0CW71 290 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 NUP107P57740 925 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 NLRP11P59045 1033 aaKnown RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 SLC10A5Q5PT55 438 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 CASS4Q9NQ75 786 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 KRT6AP02538 564 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 ALBP02768 609 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 KRT6BP04259 564 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 KRT6CP48668 564 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 EFHC2Q5JST6 749 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 RASGRP2Q7LDG7 609 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 MAML3Q96JK9 1138 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 MANSC1Q9H8J5 431 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 NDFIP2Q9NV92 336 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 STAP1Q9ULZ2 295 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 NEO1Q92859 1461 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 JAK1P23458 1154 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 KLK7P49862 253 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 COPAP53621 1224 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 KRR1Q13601 381 aaKnown RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 GCOM2Q9BZD3 368 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 MYH11P35749 1972 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 TMEM94Q12767 1356 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 PALLDQ8WX93 1383 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 HSPA1AP0DMV8 641 aaKnown RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 HSPA1BP0DMV9 641 aaKnown RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 GRAPQ13588 217 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 MAPRE1Q15691 268 aaKnown RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 CWF19L1Q69YN2 538 aaKnown RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 GRAPLQ8TC17 118 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 CMTM5Q96DZ9 223 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 CDYLQ9Y232 598 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 CPDO75976 1380 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 EPHB2P29323 1055 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 TYK2P29597 1187 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 FMR1Q06787 632 aaKnown RBP eCLIP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 PUDPQ08623 228 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 TMEM79Q9BSE2 394 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 GABBR1Q9UBS5 961 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 DCDC2Q9UHG0 476 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 DHX34Q14147 1143 aaKnown RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 ATG14Q6ZNE5 492 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 ZCCHC7Q8N3Z6 543 aaKnown RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 PSMC3IPQ9P2W1 217 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 MYO3BQ8WXR4 1341 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 TTLL13PA6NNM8 815 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 TRIM24O15164 1050 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 ASNSP08243 561 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 DGKHQ86XP1 1220 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 AHI1Q8N157 1196 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 GIMAP8Q8ND71 665 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 BEST2Q8NFU1 509 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 TBATAQ96M53 351 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 DCLRE1BQ9H816 532 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 SNX13Q9Y5W8 968 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 ZHX2Q9Y6X8 837 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 ASAP2O43150 1006 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 GUCY1B2O75343 617 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 RASSF9O75901 435 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 CPSF1Q10570 1443 aaKnown RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 STAT4Q14765 748 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 MAPRE2Q15555 327 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 ACCSLQ4AC99 568 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 B3GNT6Q6ZMB0 384 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 SIK2Q9H0K1 926 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 FEM1BQ9UK73 627 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 SH3GLB1Q9Y371 365 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 TNFRSF21O75509 655 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 FSBPO95073 299 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 SCNN1BP51168 640 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 NFX1Q12986 1120 aaKnown RBP9.08□□□□□ -0.96
CSMD1-216ENST00000602557 GOLPH3Q9H4A6 298 aa9.08□□□□□ -0.96
CSMD1-216ENST00000602557 KIF28PB7ZC32 967 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 PRPF4O43172 522 aaKnown RBP eCLIP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 DCAF4L1Q3SXM0 396 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 ANKRD40Q6AI12 368 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 NLRP9Q7RTR0 991 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 RHOT1Q8IXI2 618 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 ADGRF4Q8IZF3 695 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 PRDM5Q9NQX1 630 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 POLE3Q9NRF9 147 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 HLFQ16534 295 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 MEI1Q5TIA1 1274 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 PGBD4Q96DM1 585 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 AIPL1Q9NZN9 384 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 BFARQ9NZS9 450 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 ARHGAP31Q2M1Z3 1444 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 SAC3D1A6NKF1 404 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 HNRNPLLQ8WVV9 542 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms