RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 WNT7BP56706 349 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 LILRA4P59901 499 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 EXOC3L4Q17RC7 722 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 ZACNQ401N2 412 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 DNTTIP2Q5QJE6 756 aaKnown RBP10.8□□□□□ -0.68
UPF1-213ENST00000601981 FAM171A1Q5VUB5 890 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 PLPP4Q5VZY2 271 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 WDR59Q6PJI9 974 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 GBP6Q6ZN66 633 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 TOGARAM2Q6ZUX3 1019 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 ANKS3Q6ZW76 656 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 METTL23Q86XA0 190 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 CEP57Q86XR8 500 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 REXO1L1PQ8IX06 675 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 BCL7CQ8WUZ0 217 aaPredicted RBP10.8□□□□□ -0.68
UPF1-213ENST00000601981 BAP1Q92560 729 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 TAF4BQ92750 862 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 SYN2Q92777 582 aaPredicted RBP10.8□□□□□ -0.68
UPF1-213ENST00000601981 HPDLQ96IR7 371 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 SUSD3Q96L08 255 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 C16orf45Q96MC5 204 aaPredicted RBP10.8□□□□□ -0.68
UPF1-213ENST00000601981 POP1Q99575 1024 aaKnown RBP10.8□□□□□ -0.68
UPF1-213ENST00000601981 CDX2Q99626 313 aaPredicted RBP10.8□□□□□ -0.68
UPF1-213ENST00000601981 EMILIN2Q9BXX0 1053 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 OXCT2Q9BYC2 517 aaPredicted RBP10.8□□□□□ -0.68
UPF1-213ENST00000601981 ZBP1Q9H171 429 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 GANQ9H2C0 597 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 NSUN3Q9H649 340 aaKnown RBP10.8□□□□□ -0.68
UPF1-213ENST00000601981 TRMT1Q9NXH9 659 aaKnown RBP10.8□□□□□ -0.68
UPF1-213ENST00000601981 CHD7Q9P2D1 2997 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 FBXL5Q9UKA1 691 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 PCDHB8Q9UN66 801 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 ADGRG1Q9Y653 693 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 PTPRJQ12913 1337 aa10.8□□□□□ -0.68
UPF1-213ENST00000601981 PRUNE2Q8WUY3 3088 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.79□□□□□ -0.68
UPF1-213ENST00000601981 RFXAPO00287 272 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 P4HA2O15460 535 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 HUS1O60921 280 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 CSPG5O95196 566 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 STAU1O95793 577 aaKnown RBP10.79□□□□□ -0.68
UPF1-213ENST00000601981 SRGAP2BP0DMP2 458 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 TNNT1P13805 278 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 POU3F3P20264 500 aaPredicted RBP10.79□□□□□ -0.68
UPF1-213ENST00000601981 BRCC3P46736 316 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 GCLMP48507 274 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 FMO5P49326 533 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 TNNC1P63316 161 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 DLG4P78352 724 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 DSG1Q02413 1049 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 NCOA4Q13772 614 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 MTF1Q14872 753 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 PTPN14Q15678 1187 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 SGSM1Q2NKQ1 1148 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 ZNF699Q32M78 642 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 WDR44Q5JSH3 913 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 TDRD10Q5VZ19 366 aaKnown RBP10.79□□□□□ -0.68
UPF1-213ENST00000601981 ELMSAN1Q6PJG2 1045 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 SV2AQ7L0J3 742 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 CACNA2D4Q7Z3S7 1137 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 CCDC170Q8IYT3 715 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 RNF168Q8IYW5 571 aaPredicted RBP10.79□□□□□ -0.68
UPF1-213ENST00000601981 C3orf58Q8NDZ4 430 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 PLEKHO2Q8TD55 490 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 MYLIPQ8WY64 445 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 SENP8Q96LD8 212 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 CDCA3Q99618 268 aaPredicted RBP10.79□□□□□ -0.68
UPF1-213ENST00000601981 GPR62Q9BZJ7 368 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 DNAI2Q9GZS0 605 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 MYO6Q9UM54 1294 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 IRAK3Q9Y616 596 aa10.79□□□□□ -0.68
UPF1-213ENST00000601981 LRRC53A6NM62 1247 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 F8W810 466 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 M0QZQ0 153 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 C2CD2LO14523 706 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 CYB561D2O14569 222 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 FSCN2O14926 492 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 PMM2O15305 246 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 NCK2O43639 380 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 CXCL14O95715 111 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 C4BPAP04003 597 aaKnown RBP10.78□□□□□ -0.68
UPF1-213ENST00000601981 ADH1AP07327 375 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 TYMPP19971 482 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 FGFR3P22607 806 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 PON1P27169 355 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 CYLC1P35663 651 aaPredicted RBP10.78□□□□□ -0.68
UPF1-213ENST00000601981 AARSP49588 968 aaKnown RBP eCLIP10.78□□□□□ -0.68
UPF1-213ENST00000601981 ERVFC1P60507 584 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 MYL7Q01449 175 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 YWHAHQ04917 246 aaPredicted RBP10.78□□□□□ -0.68
UPF1-213ENST00000601981 PPP3CAQ08209 521 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 PSMD5Q16401 504 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 ZNF667Q5HYK9 610 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 KLHDC7AQ5VTJ3 777 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 ZNF280DQ6N043 979 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 DPY19L2P1Q6NXN4 242 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 RRAGAQ7L523 313 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 DPH6Q7L8W6 267 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 THEM5Q8N1Q8 247 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 TMEM86AQ8N2M4 240 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms