RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 MTHFRP42898 656 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 MYL6P60660 151 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 DLX2Q07687 328 aaPredicted RBP13.95□□□□□ -0.18
SRRM1-223ENST00000600523 KLHL40Q2TBA0 621 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 DPCR1Q3MIW9 517 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 RARS2Q5T160 578 aaKnown RBP13.95□□□□□ -0.18
SRRM1-223ENST00000600523 CAVIN1Q6NZI2 390 aaKnown RBP13.95□□□□□ -0.18
SRRM1-223ENST00000600523 RBM43Q6ZSC3 357 aaKnown RBP13.95□□□□□ -0.18
SRRM1-223ENST00000600523 SPATA31D4Q6ZUB0 917 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 ELMOD1Q8N336 334 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 TMEM130Q8N3G9 435 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 PDCL2Q8N4E4 241 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 SMRP1Q8NCR6 262 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 FBXL13Q8NEE6 735 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 VN1R2Q8NFZ6 395 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 C2orf15Q8WU43 125 aaKnown RBP13.95□□□□□ -0.18
SRRM1-223ENST00000600523 MSLNLQ96KJ4 702 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 DUSP9Q99956 384 aaKnown RBP13.95□□□□□ -0.18
SRRM1-223ENST00000600523 ADAM7Q9H2U9 754 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 VRTNQ9H8Y1 702 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 CYP4F11Q9HBI6 524 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 DDX43Q9NXZ2 648 aaKnown RBP13.95□□□□□ -0.18
SRRM1-223ENST00000600523 AFF4Q9UHB7 1163 aaKnown RBP13.95□□□□□ -0.18
SRRM1-223ENST00000600523 FBXW11Q9UKB1 542 aa13.95□□□□□ -0.18
SRRM1-223ENST00000600523 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.95□□□□□ -0.18
SRRM1-223ENST00000600523 GRXCR2A6NFK2 248 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 HLA-DRAP01903 254 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 LRG1P02750 347 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 HNRNPA1P09651 372 aaKnown RBP eCLIP13.94□□□□□ -0.18
SRRM1-223ENST00000600523 ATF2P15336 505 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 RBM10P98175 930 aaKnown RBP13.94□□□□□ -0.18
SRRM1-223ENST00000600523 GPR17Q13304 367 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 PLD1Q13393 1074 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 MAPRE1Q15691 268 aaKnown RBP13.94□□□□□ -0.18
SRRM1-223ENST00000600523 NFE2Q16621 373 aaPredicted RBP13.94□□□□□ -0.18
SRRM1-223ENST00000600523 LILRA6Q6PI73 481 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 TMC5Q6UXY8 1006 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 C15orf39Q6ZRI6 1047 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 CMASQ8NFW8 434 aaPredicted RBP13.94□□□□□ -0.18
SRRM1-223ENST00000600523 CXorf38Q8TB03 319 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 PLEKHO2Q8TD55 490 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 BORCS6Q96GS4 357 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 FAM84AQ96KN4 292 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 ACBD6Q9BR61 282 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 APOL5Q9BWW9 433 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 GZF1Q9H116 711 aaPredicted RBP13.94□□□□□ -0.18
SRRM1-223ENST00000600523 ATG2AQ2TAZ0 1938 aa13.94□□□□□ -0.18
SRRM1-223ENST00000600523 CCDC195A0A1B0GUA6 201 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 WDR27A2RRH5 827 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 ADAM12O43184 909 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 MBTPS2O43462 519 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 TBC1D4O60343 1298 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 TACC1O75410 805 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 ZMYND10O75800 440 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 ABLIM3O94929 683 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 TPM2P07951 284 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 PRKCSHP14314 528 aaPredicted RBP13.93□□□□□ -0.18
SRRM1-223ENST00000600523 HOXA9P31269 272 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 GNL1P36915 607 aaPredicted RBP13.93□□□□□ -0.18
SRRM1-223ENST00000600523 MTIF2P46199 727 aaKnown RBP13.93□□□□□ -0.18
SRRM1-223ENST00000600523 PPP3CAQ08209 521 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 ADCY1Q08828 1119 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 CBX2Q14781 532 aaPredicted RBP13.93□□□□□ -0.18
SRRM1-223ENST00000600523 SMAD2Q15796 467 aaKnown RBP13.93□□□□□ -0.18
SRRM1-223ENST00000600523 SOWAHAQ2M3V2 549 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 SLC39A12Q504Y0 691 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 SYCE2Q6PIF2 218 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 TCEAL8Q8IYN2 117 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 TTC39CQ8N584 583 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 OR6B3Q8NGW1 331 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.93□□□□□ -0.18
SRRM1-223ENST00000600523 SLC7A14Q8TBB6 771 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 SMG7Q92540 1137 aaKnown RBP13.93□□□□□ -0.18
SRRM1-223ENST00000600523 THAP9Q9H5L6 903 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 RAB20Q9NX57 234 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 L1RE1Q9UN81 338 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 POLIQ9UNA4 740 aa13.93□□□□□ -0.18
SRRM1-223ENST00000600523 USP15Q9Y4E8 981 aaPredicted RBP13.93□□□□□ -0.18
SRRM1-223ENST00000600523 P4HA2O15460 535 aa13.92□□□□□ -0.18
SRRM1-223ENST00000600523 ASS1P00966 412 aaKnown RBP13.92□□□□□ -0.18
SRRM1-223ENST00000600523 WARSP23381 471 aaKnown RBP13.92□□□□□ -0.18
SRRM1-223ENST00000600523 ALDH1A3P47895 512 aa13.92□□□□□ -0.18
SRRM1-223ENST00000600523 TUFMP49411 452 aaKnown RBP13.92□□□□□ -0.18
SRRM1-223ENST00000600523 KCNQ1P51787 676 aa13.92□□□□□ -0.18
SRRM1-223ENST00000600523 MARSP56192 900 aaKnown RBP13.92□□□□□ -0.18
SRRM1-223ENST00000600523 NOP14P78316 857 aaKnown RBP13.92□□□□□ -0.18
SRRM1-223ENST00000600523 IQCEQ6IPM2 695 aa13.92□□□□□ -0.18
SRRM1-223ENST00000600523 RSPO2Q6UXX9 243 aaPredicted RBP13.92□□□□□ -0.18
SRRM1-223ENST00000600523 C4orf50Q6ZRC1 276 aa13.92□□□□□ -0.18
SRRM1-223ENST00000600523 GPR149Q86SP6 731 aa13.92□□□□□ -0.18
SRRM1-223ENST00000600523 C12orf76Q8N812 135 aaPredicted RBP13.92□□□□□ -0.18
SRRM1-223ENST00000600523 ANKRD20A12PQ8NF67 263 aa13.92□□□□□ -0.18
SRRM1-223ENST00000600523 SPPL2BQ8TCT7 592 aa13.92□□□□□ -0.18
SRRM1-223ENST00000600523 TAS1R2Q8TE23 839 aa13.92□□□□□ -0.18
SRRM1-223ENST00000600523 SLC35C1Q96A29 364 aa13.92□□□□□ -0.18
SRRM1-223ENST00000600523 FAXDC2Q96IV6 333 aa13.92□□□□□ -0.18
SRRM1-223ENST00000600523 TNIP3Q96KP6 325 aa13.92□□□□□ -0.18
SRRM1-223ENST00000600523 RHOBTB2Q9BYZ6 727 aa13.92□□□□□ -0.18
SRRM1-223ENST00000600523 PRKD2Q9BZL6 878 aa13.92□□□□□ -0.18
SRRM1-223ENST00000600523 ZCWPW1Q9H0M4 648 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms