RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 FANCLQ9NW38 375 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 RAB20Q9NX57 234 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 CLDND1Q9NY35 253 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 DSEQ9UL01 958 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 C5orf42Q9H799 3197 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 STX10O60499 249 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 HUS1O60921 280 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 TACC1O75410 805 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 OR4Q2P0C623 313 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 SPATA31D3P0C874 917 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 CCDC192P0DO97 292 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 ZNF18P17022 549 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 WARSP23381 471 aaKnown RBP14.74□□□□□ -0.05
VRK3-219ENST00000600137 LMO2P25791 158 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 CDH8P55286 799 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 CREMQ03060 361 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 ZNF699Q32M78 642 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 HSP90AA4PQ58FG1 418 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 MIIPQ5JXC2 388 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 ZNF280DQ6N043 979 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 LLGL2Q6P1M3 1020 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 SPATA31D4Q6ZUB0 917 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 PPFIBP1Q86W92 1011 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 DHX40Q8IX18 779 aaKnown RBP14.74□□□□□ -0.05
VRK3-219ENST00000600137 TMEM86AQ8N2M4 240 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 FBXL13Q8NEE6 735 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 ZNF461Q8TAF7 563 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 SPATA18Q8TC71 538 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 TATDN2Q93075 761 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 BCO2Q9BYV7 579 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 ZCWPW1Q9H0M4 648 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 BARX2Q9UMQ3 279 aaPredicted RBP14.74□□□□□ -0.05
VRK3-219ENST00000600137 UNC80Q8N2C7 3258 aa14.74□□□□□ -0.05
VRK3-219ENST00000600137 DOCK6Q96HP0 2047 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 OR6C75A6NL08 312 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 P4HA2O15460 535 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 SEC24AO95486 1093 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 ASPAP45381 313 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 GPR17Q13304 367 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 CCDC142Q17RM4 750 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 ZNF667Q5HYK9 610 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 DPY19L2P1Q6NXN4 242 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 ANKRD54Q6NXT1 300 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 RNF19BQ6ZMZ0 732 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 APTXQ7Z2E3 356 aaKnown RBP14.73□□□□□ -0.05
VRK3-219ENST00000600137 ADGRF2Q8IZF7 708 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 HDAC7Q8WUI4 952 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 HLA-CQ95604 372 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 ACBD6Q9BR61 282 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 OXCT2Q9BYC2 517 aaPredicted RBP14.73□□□□□ -0.05
VRK3-219ENST00000600137 CRISPLD1Q9H336 500 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 SMYD3Q9H7B4 428 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.73□□□□□ -0.055e-6■■■■■ 65.2
VRK3-219ENST00000600137 TMLHEQ9NVH6 421 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 NXF1Q9UBU9 619 aaKnown RBP14.73□□□□□ -0.05
VRK3-219ENST00000600137 FBXW11Q9UKB1 542 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 COG5Q9UP83 839 aa14.73□□□□□ -0.05
VRK3-219ENST00000600137 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.73□□□□□ -0.05
VRK3-219ENST00000600137 ARHGEF37A1IGU5 675 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 LRRC10BA6NIK2 292 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 SLC34A2O95436 690 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 GLUD1P00367 558 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 AFPP02771 609 aaKnown RBP14.72□□□□□ -0.05
VRK3-219ENST00000600137 ATF2P15336 505 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 PIK3CAP42336 1068 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 LHX1P48742 406 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 NOP14P78316 857 aaKnown RBP14.72□□□□□ -0.05
VRK3-219ENST00000600137 MYL5Q02045 173 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 TFF2Q03403 129 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 TPD52L1Q16890 204 aaPredicted RBP14.72□□□□□ -0.05
VRK3-219ENST00000600137 TCP11X2Q5H9J9 407 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 FAM171BQ6P995 826 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 METTL23Q86XA0 190 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 C12orf76Q8N812 135 aaPredicted RBP14.72□□□□□ -0.05
VRK3-219ENST00000600137 KREMEN2Q8NCW0 462 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 EHBP1Q8NDI1 1231 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.72□□□□□ -0.05
VRK3-219ENST00000600137 CASP10Q92851 521 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 TUBGCP2Q9BSJ2 902 aa14.72□□□□□ -0.05
VRK3-219ENST00000600137 DDX43Q9NXZ2 648 aaKnown RBP14.72□□□□□ -0.05
VRK3-219ENST00000600137 R3HCC1Q9Y3T6 440 aaKnown RBP14.72□□□□□ -0.05
VRK3-219ENST00000600137 FSD2A1L4K1 749 aa14.71□□□□□ -0.05
VRK3-219ENST00000600137 KCNJ18B7U540 433 aa14.71□□□□□ -0.05
VRK3-219ENST00000600137 H3BQ06 376 aaPredicted RBP14.71□□□□□ -0.05
VRK3-219ENST00000600137 ATP2C2O75185 946 aa14.71□□□□□ -0.05
VRK3-219ENST00000600137 WEE2P0C1S8 567 aa14.71□□□□□ -0.05
VRK3-219ENST00000600137 KCNA5P22460 613 aa14.71□□□□□ -0.05
VRK3-219ENST00000600137 ACAT1P24752 427 aaKnown RBP14.71□□□□□ -0.05
VRK3-219ENST00000600137 RAP1GAPP47736 663 aa14.71□□□□□ -0.05
VRK3-219ENST00000600137 ZNF165P49910 485 aa14.71□□□□□ -0.05
VRK3-219ENST00000600137 KCNJ12Q14500 433 aa14.71□□□□□ -0.05
VRK3-219ENST00000600137 SKIV2LQ15477 1246 aaKnown RBP14.71□□□□□ -0.05
VRK3-219ENST00000600137 MAN2A1Q16706 1144 aa14.71□□□□□ -0.05
VRK3-219ENST00000600137 TPGS2Q68CL5 300 aa14.71□□□□□ -0.05
VRK3-219ENST00000600137 TCEAL8Q8IYN2 117 aa14.71□□□□□ -0.05
VRK3-219ENST00000600137 AOPEPQ8N6M6 819 aa14.71□□□□□ -0.05
VRK3-219ENST00000600137 UBR7Q8N806 425 aa14.71□□□□□ -0.05
VRK3-219ENST00000600137 WHAMMQ8TF30 809 aa14.71□□□□□ -0.05
VRK3-219ENST00000600137 ZNF707Q96C28 371 aaPredicted RBP14.71□□□□□ -0.05
VRK3-219ENST00000600137 FAXDC2Q96IV6 333 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms