RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 GOLGA5Q8TBA6 731 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 CCDC127Q96BQ5 260 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 SIX4Q9UIU6 781 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 SLC27A5Q9Y2P5 690 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 NUMBLQ9Y6R0 609 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 NARSO43776 548 aaKnown RBP24.32■■□□□ 1.48
CCDC9-204ENST00000599398 EXOC3O60645 756 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 PDGFBP01127 241 aaPredicted RBP24.32■■□□□ 1.48
CCDC9-204ENST00000599398 TNNI1P19237 187 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 CDR1P51861 262 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 CYP24A1Q07973 514 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 MYO1EQ12965 1108 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 PLD1Q13393 1074 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 CYP4A22Q5TCH4 519 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 CENPPQ6IPU0 288 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 PDZD4Q76G19 769 aaPredicted RBP24.32■■□□□ 1.48
CCDC9-204ENST00000599398 C12orf56Q8IXR9 622 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 CXorf38Q8TB03 319 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 RTP3Q9BQQ7 232 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 CRISPLD1Q9H336 500 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 CEP72Q9P209 647 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 FBXL21Q9UKT6 434 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 SNX9Q9Y5X1 595 aa24.32■■□□□ 1.48
CCDC9-204ENST00000599398 ANHXE9PGG2 379 aa24.31■■□□□ 1.48
CCDC9-204ENST00000599398 ALDH1A3P47895 512 aa24.31■■□□□ 1.48
CCDC9-204ENST00000599398 PSMD6Q15008 389 aa24.31■■□□□ 1.48
CCDC9-204ENST00000599398 PARM1Q6UWI2 310 aa24.31■■□□□ 1.48
CCDC9-204ENST00000599398 PDCL2Q8N4E4 241 aa24.31■■□□□ 1.48
CCDC9-204ENST00000599398 MCRS1Q96EZ8 462 aa24.31■■□□□ 1.48
CCDC9-204ENST00000599398 CCDC34Q96HJ3 373 aa24.31■■□□□ 1.48
CCDC9-204ENST00000599398 CGRRF1Q99675 332 aa24.31■■□□□ 1.48
CCDC9-204ENST00000599398 ZCWPW1Q9H0M4 648 aa24.31■■□□□ 1.48
CCDC9-204ENST00000599398 MFSD1Q9H3U5 465 aa24.31■■□□□ 1.48
CCDC9-204ENST00000599398 AVENQ9NQS1 362 aaPredicted RBP24.31■■□□□ 1.48
CCDC9-204ENST00000599398 ASAH2Q9NR71 780 aa24.31■■□□□ 1.48
CCDC9-204ENST00000599398 L1RE1Q9UN81 338 aa24.31■■□□□ 1.48
CCDC9-204ENST00000599398 ZNF197O14709 1029 aa24.3■■□□□ 1.48
CCDC9-204ENST00000599398 PRPF40AO75400 957 aaKnown RBP24.3■■□□□ 1.48
CCDC9-204ENST00000599398 MYL4P12829 197 aa24.3■■□□□ 1.48
CCDC9-204ENST00000599398 CEBPBP17676 345 aa24.3■■□□□ 1.48
CCDC9-204ENST00000599398 EPHB3P54753 998 aa24.3■■□□□ 1.48
CCDC9-204ENST00000599398 DPYDQ12882 1025 aa24.3■■□□□ 1.48
CCDC9-204ENST00000599398 MTSS1LQ765P7 747 aa24.3■■□□□ 1.48
CCDC9-204ENST00000599398 HS6ST3Q8IZP7 471 aa24.3■■□□□ 1.48
CCDC9-204ENST00000599398 TTC9BQ8N6N2 239 aa24.3■■□□□ 1.48
CCDC9-204ENST00000599398 FGF14Q92915 247 aa24.3■■□□□ 1.48
CCDC9-204ENST00000599398 TCEAL4Q96EI5 215 aa24.3■■□□□ 1.48
CCDC9-204ENST00000599398 HPDLQ96IR7 371 aa24.3■■□□□ 1.48
CCDC9-204ENST00000599398 SOAT2O75908 522 aa24.29■■□□□ 1.48
CCDC9-204ENST00000599398 CFHP08603 1231 aa24.29■■□□□ 1.48
CCDC9-204ENST00000599398 TSPY1Q01534 308 aa24.29■■□□□ 1.48
CCDC9-204ENST00000599398 PRSS36Q5K4E3 855 aa24.29■■□□□ 1.48
CCDC9-204ENST00000599398 TRAPPC11Q7Z392 1133 aa24.29■■□□□ 1.48
CCDC9-204ENST00000599398 DCP1BQ8IZD4 617 aaKnown RBP24.29■■□□□ 1.48
CCDC9-204ENST00000599398 SEPT5Q99719 369 aaPredicted RBP24.29■■□□□ 1.48
CCDC9-204ENST00000599398 GDAP2Q9NXN4 497 aa24.29■■□□□ 1.48
CCDC9-204ENST00000599398 MUC6Q6W4X9 2439 aa24.28■■□□□ 1.48
CCDC9-204ENST00000599398 RHOBTB3O94955 611 aa24.28■■□□□ 1.48
CCDC9-204ENST00000599398 KIF20AO95235 890 aa24.28■■□□□ 1.48
CCDC9-204ENST00000599398 SRFP11831 508 aa24.28■■□□□ 1.48
CCDC9-204ENST00000599398 CCR2P41597 374 aa24.28■■□□□ 1.48
CCDC9-204ENST00000599398 MGAT5BQ3V5L5 792 aa24.28■■□□□ 1.48
CCDC9-204ENST00000599398 LRRTM3Q86VH5 581 aa24.28■■□□□ 1.48
CCDC9-204ENST00000599398 TMEM86AQ8N2M4 240 aa24.28■■□□□ 1.48
CCDC9-204ENST00000599398 TOP6BLQ8N6T0 577 aa24.28■■□□□ 1.48
CCDC9-204ENST00000599398 LEMD2Q8NC56 503 aa24.28■■□□□ 1.48
CCDC9-204ENST00000599398 KXD1Q9BQD3 176 aa24.28■■□□□ 1.48
CCDC9-204ENST00000599398 RPP25Q9BUL9 199 aaKnown RBP24.28■■□□□ 1.48
CCDC9-204ENST00000599398 KCTD10Q9H3F6 313 aa24.28■■□□□ 1.48
CCDC9-204ENST00000599398 DDX43Q9NXZ2 648 aaKnown RBP24.28■■□□□ 1.48
CCDC9-204ENST00000599398 ABI2Q9NYB9 513 aaPredicted RBP24.28■■□□□ 1.48
CCDC9-204ENST00000599398 GDE1Q9NZC3 331 aa24.28■■□□□ 1.48
CCDC9-204ENST00000599398 PDXKO00764 312 aa24.27■■□□□ 1.48
CCDC9-204ENST00000599398 TUFMP49411 452 aaKnown RBP24.27■■□□□ 1.48
CCDC9-204ENST00000599398 MYL7Q01449 175 aa24.27■■□□□ 1.48
CCDC9-204ENST00000599398 SMARCB1Q12824 385 aa24.27■■□□□ 1.48
CCDC9-204ENST00000599398 ADGRF2Q8IZF7 708 aa24.27■■□□□ 1.48
CCDC9-204ENST00000599398 SIX5Q8N196 739 aa24.27■■□□□ 1.48
CCDC9-204ENST00000599398 FAM200AQ8TCP9 573 aa24.27■■□□□ 1.48
CCDC9-204ENST00000599398 HSFX1Q9UBD0 423 aa24.27■■□□□ 1.48
CCDC9-204ENST00000599398 NR3C1P04150 777 aa24.26■■□□□ 1.47
CCDC9-204ENST00000599398 GJA1P17302 382 aa24.26■■□□□ 1.47
CCDC9-204ENST00000599398 ACAT1P24752 427 aaKnown RBP24.26■■□□□ 1.47
CCDC9-204ENST00000599398 VCPP55072 806 aaKnown RBP24.26■■□□□ 1.47
CCDC9-204ENST00000599398 SPPL2BQ8TCT7 592 aa24.26■■□□□ 1.47
CCDC9-204ENST00000599398 C2orf15Q8WU43 125 aaKnown RBP24.26■■□□□ 1.47
CCDC9-204ENST00000599398 DNAJC25Q9H1X3 360 aa24.26■■□□□ 1.47
CCDC9-204ENST00000599398 MAPK8IP1Q9UQF2 711 aa24.26■■□□□ 1.47
CCDC9-204ENST00000599398 ARIH1Q9Y4X5 557 aaPredicted RBP24.26■■□□□ 1.47
CCDC9-204ENST00000599398 WDFY4Q6ZS81 3184 aa24.26■■□□□ 1.47
CCDC9-204ENST00000599398 CALUO43852 315 aaPredicted RBP24.25■■□□□ 1.47
CCDC9-204ENST00000599398 PHACTR2O75167 634 aa24.25■■□□□ 1.47
CCDC9-204ENST00000599398 MICAL2O94851 1124 aa24.25■■□□□ 1.47
CCDC9-204ENST00000599398 CASP4P49662 377 aa24.25■■□□□ 1.47
CCDC9-204ENST00000599398 EPHA5P54756 1037 aa24.25■■□□□ 1.47
CCDC9-204ENST00000599398 TRPC3Q13507 836 aa24.25■■□□□ 1.47
CCDC9-204ENST00000599398 KCNB1Q14721 858 aa24.25■■□□□ 1.47
CCDC9-204ENST00000599398 VEPH1Q14D04 833 aa24.25■■□□□ 1.47
CCDC9-204ENST00000599398 SOWAHAQ2M3V2 549 aa24.25■■□□□ 1.47
CCDC9-204ENST00000599398 ITIH5Q86UX2 942 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms