RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 TRIM69Q86WT6 500 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 METTL5Q9NRN9 209 aaKnown RBP12.35□□□□□ -0.43
SCN8A-208ENST00000599343 PSD3Q9NYI0 1048 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 STMN3Q9NZ72 180 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 PNMA8BQ9ULN7 279 aaPredicted RBP12.35□□□□□ -0.43
SCN8A-208ENST00000599343 CLASP2O75122 1294 aaKnown RBP12.35□□□□□ -0.43
SCN8A-208ENST00000599343 POLBP06746 335 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 NR1I3Q14994 352 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 ZRANB3Q5FWF4 1079 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 GJB7Q6PEY0 223 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 BBS7Q8IWZ6 715 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 ZNF786Q8N393 782 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 MED15Q96RN5 788 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 ANKARQ7Z5J8 1434 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 MYMKA6NI61 221 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 HNRNPRO43390 633 aaKnown RBP12.35□□□□□ -0.43
SCN8A-208ENST00000599343 HMGCS2P54868 508 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 SEPT5Q99719 369 aaPredicted RBP12.35□□□□□ -0.43
SCN8A-208ENST00000599343 PI4K2AQ9BTU6 479 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.35□□□□□ -0.43
SCN8A-208ENST00000599343 PAK5Q9P286 719 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 NLRP1Q9C000 1473 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 ITIH6Q6UXX5 1313 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.35□□□□□ -0.43
SCN8A-208ENST00000599343 PLA2G4FQ68DD2 849 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 WDR35Q9P2L0 1181 aa12.35□□□□□ -0.43
SCN8A-208ENST00000599343 A0A1B0GW55 424 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 USP1O94782 785 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 DUX4L2P0CJ85 424 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 DUX4L3P0CJ86 424 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 DUX4L4P0CJ87 422 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 DUX4L5P0CJ88 424 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 DUX4L6P0CJ89 424 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 DUX4L7P0CJ90 424 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 MZF1P28698 734 aaPredicted RBP12.34□□□□□ -0.43
SCN8A-208ENST00000599343 DNAJC3Q13217 504 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 MTMR2Q13614 643 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 ARHGAP17Q68EM7 881 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 NSMCE4AQ9NXX6 385 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 DUX4Q9UBX2 424 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 COL15A1P39059 1388 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 CST8O60676 142 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 TADA2AO75478 443 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 ZNF189O75820 626 aaPredicted RBP12.34□□□□□ -0.43
SCN8A-208ENST00000599343 ALBP02768 609 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 EPB42P16452 691 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 CHRM3P20309 590 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 ST8SIA6P61647 398 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 ARHGEF7Q14155 803 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 PDIA5Q14554 519 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 PTGISQ16647 500 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 GOLGA7BQ2TAP0 167 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 MFSD14CQ5VZR4 134 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.34□□□□□ -0.43
SCN8A-208ENST00000599343 SGMS1Q86VZ5 419 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 KCNB2Q92953 911 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 C7orf25Q9BPX7 421 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 RERGLQ9H628 205 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 GRID1Q9ULK0 1009 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 SSU72P8A0A1W2PR75 194 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 RHOBTB1O94844 696 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 STK4Q13043 487 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 SLC29A2Q14542 456 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 SGSM1Q2NKQ1 1148 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 CHMP1BQ7LBR1 199 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 LUZP2Q86TE4 346 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 PHF20Q9BVI0 1012 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 CDK12Q9NYV4 1490 aaPredicted RBP12.34□□□□□ -0.43
SCN8A-208ENST00000599343 PGK2P07205 417 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 RALBP11234 206 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 ARL4DP49703 201 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 MIER2Q8N344 545 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 ZNF669Q96BR6 464 aaPredicted RBP12.34□□□□□ -0.43
SCN8A-208ENST00000599343 SEPT3Q9UH03 358 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 KDM5CP41229 1560 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 VHLP40337 213 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 IRAK1P51617 712 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 NCALDP61601 193 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 TRIP4Q15650 581 aaPredicted RBP12.34□□□□□ -0.43
SCN8A-208ENST00000599343 TC2NQ8N9U0 490 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 NOA1Q8NC60 698 aaKnown RBP12.34□□□□□ -0.43
SCN8A-208ENST00000599343 ROBO2Q9HCK4 1378 aa12.34□□□□□ -0.43
SCN8A-208ENST00000599343 SERPINB5P36952 375 aa12.33□□□□□ -0.43
SCN8A-208ENST00000599343 HPCAP84074 193 aa12.33□□□□□ -0.43
SCN8A-208ENST00000599343 DSG1Q02413 1049 aa12.33□□□□□ -0.43
SCN8A-208ENST00000599343 CPSF1Q10570 1443 aaKnown RBP12.33□□□□□ -0.43
SCN8A-208ENST00000599343 AASDHQ4L235 1098 aaPredicted RBP12.33□□□□□ -0.43
SCN8A-208ENST00000599343 DCAF6Q58WW2 860 aa12.33□□□□□ -0.43
SCN8A-208ENST00000599343 FAXCQ5TGI0 409 aa12.33□□□□□ -0.43
SCN8A-208ENST00000599343 GPAT2Q6NUI2 795 aa12.33□□□□□ -0.43
SCN8A-208ENST00000599343 PODNQ7Z5L7 613 aa12.33□□□□□ -0.43
SCN8A-208ENST00000599343 CLEC10AQ8IUN9 316 aa12.33□□□□□ -0.43
SCN8A-208ENST00000599343 SEPT12Q8IYM1 358 aa12.33□□□□□ -0.43
SCN8A-208ENST00000599343 USP38Q8NB14 1042 aa12.33□□□□□ -0.43
SCN8A-208ENST00000599343 NEDD1Q8NHV4 660 aa12.33□□□□□ -0.43
SCN8A-208ENST00000599343 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.33□□□□□ -0.43
SCN8A-208ENST00000599343 KRT35Q92764 455 aa12.33□□□□□ -0.43
SCN8A-208ENST00000599343 KIF2CQ99661 725 aa12.33□□□□□ -0.43
SCN8A-208ENST00000599343 NOD2Q9HC29 1040 aa12.33□□□□□ -0.43
SCN8A-208ENST00000599343 ALDH1A1P00352 501 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms