RNA–Protein interactions for RNA: ENST00000598697.5

TRPM4-211, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2

Gene TRPM4, Length 3,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-211ENST00000598697 GPATCH1Q9BRR8 931 aaKnown RBP16.09■□□□□ 0.17
TRPM4-211ENST00000598697 EPB41L1Q9H4G0 881 aa16.09■□□□□ 0.17
TRPM4-211ENST00000598697 PARVBQ9HBI1 364 aa16.09■□□□□ 0.17
TRPM4-211ENST00000598697 MOSPD1Q9UJG1 213 aa16.09■□□□□ 0.17
TRPM4-211ENST00000598697 NOTOA8MTQ0 251 aa16.09■□□□□ 0.17
TRPM4-211ENST00000598697 CES2O00748 559 aa16.09■□□□□ 0.17
TRPM4-211ENST00000598697 UCHL3P15374 230 aa16.09■□□□□ 0.17
TRPM4-211ENST00000598697 VCPP55072 806 aaKnown RBP16.09■□□□□ 0.17
TRPM4-211ENST00000598697 MAPK7Q13164 816 aa16.09■□□□□ 0.17
TRPM4-211ENST00000598697 SNRNP48Q6IEG0 339 aaKnown RBP16.09■□□□□ 0.17
TRPM4-211ENST00000598697 MFSD5Q6N075 450 aa16.09■□□□□ 0.17
TRPM4-211ENST00000598697 TAS2R1Q9NYW7 299 aa16.09■□□□□ 0.17
TRPM4-211ENST00000598697 NUMBLQ9Y6R0 609 aa16.09■□□□□ 0.17
TRPM4-211ENST00000598697 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.17
TRPM4-211ENST00000598697 CALML3P27482 149 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 HOXD13P35453 343 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 ACADVLP49748 655 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 CCT8P50990 548 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 SCNN1DP51172 638 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 NCOA4Q13772 614 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 C1orf146Q5VVC0 180 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 ZNF772Q68DY9 489 aaPredicted RBP16.08■□□□□ 0.17
TRPM4-211ENST00000598697 CCDC62Q6P9F0 684 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 IYDQ6PHW0 289 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 NSL1Q96IY1 281 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 PNMA5Q96PV4 448 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 GANQ9H2C0 597 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 BHMT2Q9H2M3 363 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 C12orf65Q9H3J6 166 aaKnown RBP16.08■□□□□ 0.17
TRPM4-211ENST00000598697 TBC1D23Q9NUY8 699 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 MKS1Q9NXB0 559 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 VPS51Q9UID3 782 aa16.08■□□□□ 0.17
TRPM4-211ENST00000598697 MYOCOSA0A1B0GUC4 107 aa16.08■□□□□ 0.16
TRPM4-211ENST00000598697 FOXD2O60548 495 aaPredicted RBP16.08■□□□□ 0.16
TRPM4-211ENST00000598697 CDH3P22223 829 aa16.08■□□□□ 0.16
TRPM4-211ENST00000598697 BTDP43251 543 aa16.08■□□□□ 0.16
TRPM4-211ENST00000598697 TFAP4Q01664 338 aa16.08■□□□□ 0.16
TRPM4-211ENST00000598697 MOGSQ13724 837 aa16.08■□□□□ 0.16
TRPM4-211ENST00000598697 NR1D2Q14995 579 aa16.08■□□□□ 0.16
TRPM4-211ENST00000598697 ECM1Q16610 540 aa16.08■□□□□ 0.16
TRPM4-211ENST00000598697 MIER3Q7Z3K6 550 aa16.08■□□□□ 0.16
TRPM4-211ENST00000598697 BPHLQ86WA6 291 aaPredicted RBP16.08■□□□□ 0.16
TRPM4-211ENST00000598697 GUF1Q8N442 669 aaKnown RBP16.08■□□□□ 0.16
TRPM4-211ENST00000598697 SNX29Q8TEQ0 813 aa16.08■□□□□ 0.16
TRPM4-211ENST00000598697 CLPTM1LQ96KA5 538 aa16.08■□□□□ 0.16
TRPM4-211ENST00000598697 PAIP1Q9H074 479 aaKnown RBP16.08■□□□□ 0.16
TRPM4-211ENST00000598697 CCDC68Q9H2F9 335 aa16.08■□□□□ 0.16
TRPM4-211ENST00000598697 LRP5O75197 1615 aa16.08■□□□□ 0.16
TRPM4-211ENST00000598697 USP17L3A6NCW0 530 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 USP17L4A6NCW7 530 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 TCEA1P23193 301 aaKnown RBP16.07■□□□□ 0.16
TRPM4-211ENST00000598697 TNFAIP8L3Q5GJ75 292 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 CCDC137Q6PK04 289 aaKnown RBP16.07■□□□□ 0.16
TRPM4-211ENST00000598697 USP17L1Q7RTZ2 530 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 NLGN1Q8N2Q7 840 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 C9orf72Q96LT7 481 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 NEURL2Q9BR09 285 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 BRIP1Q9BX63 1249 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 ROPN1BQ9BZX4 212 aaPredicted RBP16.07■□□□□ 0.16
TRPM4-211ENST00000598697 RETREG1Q9H6L5 497 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 ROPN1Q9HAT0 212 aaPredicted RBP16.07■□□□□ 0.16
TRPM4-211ENST00000598697 SAR1AQ9NR31 198 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 APPL1Q9UKG1 709 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 KLRF2D3W0D1 207 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 BBOX1O75936 387 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 ATP2B4P23634 1241 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 NAPAP54920 295 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 SPIDRQ14159 915 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 TMED2Q15363 201 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 GRAMD1BQ3KR37 738 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 HERC4Q5GLZ8 1057 aaPredicted RBP16.07■□□□□ 0.16
TRPM4-211ENST00000598697 RIPOR1Q6ZS17 1223 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 C4orf33Q8N1A6 199 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 RASGEF1CQ8N431 466 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 GALNT4Q8N4A0 578 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 PRELID2Q8N945 189 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 C10orf82Q8WW14 230 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 C1orf54Q8WWF1 131 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 ANKRD36BP1Q96IX9 119 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 BTBD6Q96KE9 485 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.07■□□□□ 0.16
TRPM4-211ENST00000598697 STXBP5LQ9Y2K9 1186 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 AK5Q9Y6K8 562 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 C2orf71A6NGG8 1288 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 A8MXQ7 604 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 HNRNPCL1O60812 293 aaKnown RBP16.07■□□□□ 0.16
TRPM4-211ENST00000598697 TRPA1O75762 1119 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 PLCB3Q01970 1234 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 EN1Q05925 392 aaPredicted RBP16.07■□□□□ 0.16
TRPM4-211ENST00000598697 ADRM1Q16186 407 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 CYP4F22Q6NT55 531 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 TBCKQ8TEA7 893 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 SKA1Q96BD8 255 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 PRR11Q96HE9 360 aaPredicted RBP16.07■□□□□ 0.16
TRPM4-211ENST00000598697 RUNDC3BQ96NL0 473 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 TMEM109Q9BVC6 243 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 BAZ2AQ9UIF9 1905 aaKnown RBP16.07■□□□□ 0.16
TRPM4-211ENST00000598697 THSD7AQ9UPZ6 1657 aa16.07■□□□□ 0.16
TRPM4-211ENST00000598697 ATMINO43313 823 aaPredicted RBP16.06■□□□□ 0.16
TRPM4-211ENST00000598697 CYTH3O43739 400 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms