RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 PGLYRP2Q96PD5 576 aa14.89□□□□□ -0.03
UPF1-205ENST00000598209 TSG101Q99816 390 aa14.89□□□□□ -0.03
UPF1-205ENST00000598209 USTQ9Y2C2 406 aa14.89□□□□□ -0.03
UPF1-205ENST00000598209 INSL5Q9Y5Q6 135 aa14.89□□□□□ -0.03
UPF1-205ENST00000598209 BIN1O00499 593 aa14.88□□□□□ -0.03
UPF1-205ENST00000598209 VNN2O95498 520 aa14.88□□□□□ -0.03
UPF1-205ENST00000598209 LRG1P02750 347 aa14.88□□□□□ -0.03
UPF1-205ENST00000598209 PSMC2P35998 433 aaKnown RBP14.88□□□□□ -0.03
UPF1-205ENST00000598209 VAMP7P51809 220 aa14.88□□□□□ -0.03
UPF1-205ENST00000598209 BIRC3Q13489 604 aa14.88□□□□□ -0.03
UPF1-205ENST00000598209 STIM1Q13586 685 aa14.88□□□□□ -0.03
UPF1-205ENST00000598209 MORC3Q14149 939 aa14.88□□□□□ -0.03
UPF1-205ENST00000598209 CAMK4Q16566 473 aa14.88□□□□□ -0.03
UPF1-205ENST00000598209 TDRD10Q5VZ19 366 aaKnown RBP14.88□□□□□ -0.03
UPF1-205ENST00000598209 OTOP3Q7RTS5 596 aa14.88□□□□□ -0.03
UPF1-205ENST00000598209 GRASPQ7Z6J2 395 aaPredicted RBP14.88□□□□□ -0.03
UPF1-205ENST00000598209 ADGRF2Q8IZF7 708 aa14.88□□□□□ -0.03
UPF1-205ENST00000598209 TOP6BLQ8N6T0 577 aa14.88□□□□□ -0.03
UPF1-205ENST00000598209 ACSF2Q96CM8 615 aaPredicted RBP14.88□□□□□ -0.03
UPF1-205ENST00000598209 ZCWPW1Q9H0M4 648 aa14.88□□□□□ -0.03
UPF1-205ENST00000598209 MUC3AQ02505 3323 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 BDP1A6H8Y1 2624 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 MTMR11A4FU01 709 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 TRIM49BA6NDI0 452 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 PSMA7O14818 248 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 CETN3O15182 167 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 C4BPAP04003 597 aaKnown RBP14.87□□□□□ -0.03
UPF1-205ENST00000598209 KRT13P13646 458 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 CD44P16070 742 aaKnown RBP14.87□□□□□ -0.03
UPF1-205ENST00000598209 BMP6P22004 513 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 PPP1R2P41236 205 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 PMS1P54277 932 aaKnown RBP14.87□□□□□ -0.03
UPF1-205ENST00000598209 MYL6P60660 151 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 NTHL1P78549 312 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 DUSP4Q13115 394 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 SOWAHAQ2M3V2 549 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 SLC39A12Q504Y0 691 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 C1orf220Q5T0J3 134 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 ANKRD40Q6AI12 368 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 INTS8Q75QN2 995 aaKnown RBP14.87□□□□□ -0.03
UPF1-205ENST00000598209 DPH6Q7L8W6 267 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 OSTM1Q86WC4 334 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 ZDHHC14Q8IZN3 488 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 ATAD1Q8NBU5 361 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 SPATA18Q8TC71 538 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 EEF2KMTQ96G04 330 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 GBP4Q96PP9 640 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 MKNK1Q9BUB5 465 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 CRISPLD1Q9H336 500 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 HCFC1R1Q9NWW0 138 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 DDX43Q9NXZ2 648 aaKnown RBP14.87□□□□□ -0.03
UPF1-205ENST00000598209 DNMT3BQ9UBC3 853 aaKnown RBP14.87□□□□□ -0.03
UPF1-205ENST00000598209 MUTYHQ9UIF7 546 aa14.87□□□□□ -0.03
UPF1-205ENST00000598209 PI4K2BG5E9Z4 385 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 GABRDO14764 452 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 IKBKBO14920 756 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 DCXO43602 365 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 N4BP1O75113 896 aaKnown RBP14.86□□□□□ -0.03
UPF1-205ENST00000598209 STAU1O95793 577 aaKnown RBP14.86□□□□□ -0.03
UPF1-205ENST00000598209 TRIM49P0CI25 452 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 TRIM49CP0CI26 452 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 EPB41P11171 864 aaKnown RBP14.86□□□□□ -0.03
UPF1-205ENST00000598209 FSHRP23945 695 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 CCNE1P24864 410 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 ATICP31939 592 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 GBP2P32456 591 aaPredicted RBP14.86□□□□□ -0.03
UPF1-205ENST00000598209 LHX1P48742 406 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 CDR1P51861 262 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 FKBP3Q00688 224 aaKnown RBP14.86□□□□□ -0.03
UPF1-205ENST00000598209 MYL7Q01449 175 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 TSPY1Q01534 308 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 LRRC63Q05C16 580 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 ENPEPQ07075 957 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 TWF1Q12792 350 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 NCOA4Q13772 614 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 WDR72Q3MJ13 1102 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 ZACNQ401N2 412 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 KLHL10Q6JEL2 608 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 SV2AQ7L0J3 742 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 GET4Q7L5D6 327 aaPredicted RBP14.86□□□□□ -0.03
UPF1-205ENST00000598209 LIMS2Q7Z4I7 341 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 LRRTM3Q86VH5 581 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 ZC3H3Q8IXZ2 948 aaKnown RBP14.86□□□□□ -0.03
UPF1-205ENST00000598209 DCP1BQ8IZD4 617 aaKnown RBP14.86□□□□□ -0.03
UPF1-205ENST00000598209 PLCD3Q8N3E9 789 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 TTC9BQ8N6N2 239 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 SYAP1Q96A49 352 aaPredicted RBP14.86□□□□□ -0.03
UPF1-205ENST00000598209 DHTKD1Q96HY7 919 aaPredicted RBP14.86□□□□□ -0.03
UPF1-205ENST00000598209 MYADMQ96S97 322 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 MMS19Q96T76 1030 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 ACBD6Q9BR61 282 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 XYLT2Q9H1B5 865 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 EPHX3Q9H6B9 360 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 LMBRD1Q9NUN5 540 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 KIAA1468Q9P260 1216 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 SLC27A5Q9Y2P5 690 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 YIPF1Q9Y548 306 aa14.86□□□□□ -0.03
UPF1-205ENST00000598209 PPP1R3GB7ZBB8 358 aa14.85□□□□□ -0.03
UPF1-205ENST00000598209 CLSTN1O94985 981 aa14.85□□□□□ -0.03
UPF1-205ENST00000598209 VNN1O95497 513 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms