RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 RAB20Q9NX57 234 aa21.8■■□□□ 1.08
PNKP-211ENST00000598020 MAFFQ9ULX9 164 aa21.8■■□□□ 1.08
PNKP-211ENST00000598020 NFE2L3Q9Y4A8 694 aa21.8■■□□□ 1.08
PNKP-211ENST00000598020 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.8■■□□□ 1.08
PNKP-211ENST00000598020 SYCE3A1L190 88 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 PAPLNO95428 1278 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 P4HA1P13674 534 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 WARSP23381 471 aaKnown RBP21.79■■□□□ 1.08
PNKP-211ENST00000598020 DLX2Q07687 328 aaPredicted RBP21.79■■□□□ 1.08
PNKP-211ENST00000598020 KCNH2Q12809 1159 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 TPGS2Q68CL5 300 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 ANKRD54Q6NXT1 300 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 LLGL2Q6P1M3 1020 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 ELMSAN1Q6PJG2 1045 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 RTL10Q7L3V2 364 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 GLYCTKQ8IVS8 523 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 ADGRF2Q8IZF7 708 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 KBTBD7Q8WVZ9 684 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 SEMA4DQ92854 862 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 ACBD6Q9BR61 282 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 FBXW11Q9UKB1 542 aa21.79■■□□□ 1.08
PNKP-211ENST00000598020 WDR27A2RRH5 827 aa21.78■■□□□ 1.08
PNKP-211ENST00000598020 SLC34A2O95436 690 aa21.78■■□□□ 1.08
PNKP-211ENST00000598020 AFPP02771 609 aaKnown RBP21.78■■□□□ 1.08
PNKP-211ENST00000598020 MYL5Q02045 173 aa21.78■■□□□ 1.08
PNKP-211ENST00000598020 GPR17Q13304 367 aa21.78■■□□□ 1.08
PNKP-211ENST00000598020 ZSCAN23Q3MJ62 389 aa21.78■■□□□ 1.08
PNKP-211ENST00000598020 ANO6Q4KMQ2 910 aa21.78■■□□□ 1.08
PNKP-211ENST00000598020 CCDC150Q8NCX0 1101 aa21.78■■□□□ 1.08
PNKP-211ENST00000598020 OR10T2Q8NGX3 314 aa21.78■■□□□ 1.08
PNKP-211ENST00000598020 MMS19Q96T76 1030 aa21.78■■□□□ 1.08
PNKP-211ENST00000598020 ZCWPW1Q9H0M4 648 aa21.78■■□□□ 1.08
PNKP-211ENST00000598020 SAMSN1Q9NSI8 373 aaKnown RBP21.78■■□□□ 1.08
PNKP-211ENST00000598020 NXF1Q9UBU9 619 aaKnown RBP21.78■■□□□ 1.08
PNKP-211ENST00000598020 BARX2Q9UMQ3 279 aaPredicted RBP21.78■■□□□ 1.08
PNKP-211ENST00000598020 REV3LO60673 3130 aa21.77■■□□□ 1.08
PNKP-211ENST00000598020 ATF2P15336 505 aa21.77■■□□□ 1.08
PNKP-211ENST00000598020 EEF1GP26641 437 aaKnown RBP21.77■■□□□ 1.08
PNKP-211ENST00000598020 NOP14P78316 857 aaKnown RBP21.77■■□□□ 1.08
PNKP-211ENST00000598020 MYL7Q01449 175 aa21.77■■□□□ 1.08
PNKP-211ENST00000598020 CETN1Q12798 172 aa21.77■■□□□ 1.08
PNKP-211ENST00000598020 LEXMQ3ZCV2 418 aa21.77■■□□□ 1.08
PNKP-211ENST00000598020 CDKAL1Q5VV42 579 aa21.77■■□□□ 1.08
PNKP-211ENST00000598020 SYCE2Q6PIF2 218 aa21.77■■□□□ 1.08
PNKP-211ENST00000598020 OSTM1Q86WC4 334 aa21.77■■□□□ 1.08
PNKP-211ENST00000598020 KREMEN2Q8NCW0 462 aa21.77■■□□□ 1.08
PNKP-211ENST00000598020 PI4K2AQ9BTU6 479 aa21.77■■□□□ 1.08
PNKP-211ENST00000598020 APOBEC3GQ9HC16 384 aaKnown RBP21.77■■□□□ 1.08
PNKP-211ENST00000598020 PRDM6Q9NQX0 595 aa21.77■■□□□ 1.08
PNKP-211ENST00000598020 MAN1C1Q9NR34 630 aa21.77■■□□□ 1.08
PNKP-211ENST00000598020 DDX43Q9NXZ2 648 aaKnown RBP21.77■■□□□ 1.08
PNKP-211ENST00000598020 THEGQ9P2T0 379 aa21.77■■□□□ 1.08
PNKP-211ENST00000598020 MAGEC2Q9UBF1 373 aaPredicted RBP21.77■■□□□ 1.08
PNKP-211ENST00000598020 AFF4Q9UHB7 1163 aaKnown RBP21.77■■□□□ 1.08
PNKP-211ENST00000598020 POLIQ9UNA4 740 aa21.77■■□□□ 1.08
PNKP-211ENST00000598020 LRRN2O75325 713 aa21.76■■□□□ 1.07
PNKP-211ENST00000598020 PRKCSHP14314 528 aaPredicted RBP21.76■■□□□ 1.07
PNKP-211ENST00000598020 KCNA5P22460 613 aa21.76■■□□□ 1.07
PNKP-211ENST00000598020 PCSK1P29120 753 aa21.76■■□□□ 1.07
PNKP-211ENST00000598020 ASPAP45381 313 aa21.76■■□□□ 1.07
PNKP-211ENST00000598020 SMARCB1Q12824 385 aa21.76■■□□□ 1.07
PNKP-211ENST00000598020 NCAPHQ15003 741 aa21.76■■□□□ 1.07
PNKP-211ENST00000598020 MAN2A1Q16706 1144 aa21.76■■□□□ 1.07
PNKP-211ENST00000598020 UVSSAQ2YD98 709 aa21.76■■□□□ 1.07
PNKP-211ENST00000598020 SPOPLQ6IQ16 392 aa21.76■■□□□ 1.07
PNKP-211ENST00000598020 EP400NLQ6ZTU2 488 aa21.76■■□□□ 1.07
PNKP-211ENST00000598020 CMASQ8NFW8 434 aaPredicted RBP21.76■■□□□ 1.07
PNKP-211ENST00000598020 MRPL45Q9BRJ2 306 aaKnown RBP21.76■■□□□ 1.07
PNKP-211ENST00000598020 BCO2Q9BYV7 579 aa21.76■■□□□ 1.07
PNKP-211ENST00000598020 RHOBTB2Q9BYZ6 727 aa21.76■■□□□ 1.07
PNKP-211ENST00000598020 FAM124BQ9H5Z6 455 aaPredicted RBP21.76■■□□□ 1.07
PNKP-211ENST00000598020 CYP3A43Q9HB55 503 aa21.76■■□□□ 1.07
PNKP-211ENST00000598020 COL6A3P12111 3177 aa21.76■■□□□ 1.07
PNKP-211ENST00000598020 KCNJ18B7U540 433 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 CAVIN2O95810 425 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 CPB1P15086 417 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 GNL1P36915 607 aaPredicted RBP21.75■■□□□ 1.07
PNKP-211ENST00000598020 MTIF2P46199 727 aaKnown RBP21.75■■□□□ 1.07
PNKP-211ENST00000598020 KCNJ12Q14500 433 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 TCP11X2Q5H9J9 407 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 WDR44Q5JSH3 913 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 TCEAL8Q8IYN2 117 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 DCP1BQ8IZD4 617 aaKnown RBP21.75■■□□□ 1.07
PNKP-211ENST00000598020 SMRP1Q8NCR6 262 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 LMO3Q8TAP4 145 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 TMEM209Q96SK2 561 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 NIF3L1Q9GZT8 377 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 S1PR5Q9H228 398 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 SFXN1Q9H9B4 322 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 FANCLQ9NW38 375 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 HSFX1Q9UBD0 423 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 CD207Q9UJ71 328 aa21.75■■□□□ 1.07
PNKP-211ENST00000598020 ZMYND10O75800 440 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 SPATA31D3P0C874 917 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 ARPP19P56211 112 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 TSPY1Q01534 308 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 AAK1Q2M2I8 961 aa21.74■■□□□ 1.07
PNKP-211ENST00000598020 PUS10Q3MIT2 529 aaKnown RBP21.74■■□□□ 1.07
PNKP-211ENST00000598020 INTS6LQ5JSJ4 861 aaKnown RBP21.74■■□□□ 1.07
PNKP-211ENST00000598020 SPATA31D4Q6ZUB0 917 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms