RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 SDCBP2Q9H190 292 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 XYLT2Q9H1B5 865 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 FAM207AQ9NSI2 230 aaPredicted RBP9.96□□□□□ -0.82
ZNF548-206ENST00000597047 DDX43Q9NXZ2 648 aaKnown RBP9.96□□□□□ -0.82
ZNF548-206ENST00000597047 DSEQ9UL01 958 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 LZTS1Q9Y250 596 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 PCDHB4Q9Y5E5 795 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 CDY1Q9Y6F8 540 aa9.96□□□□□ -0.82
ZNF548-206ENST00000597047 COL4A4P53420 1690 aaPredicted RBP9.96□□□□□ -0.82
ZNF548-206ENST00000597047 TMEM265A0A087WTH1 108 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 LGALS16A8MUM7 142 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 SYN3O14994 580 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 P4HA2O15460 535 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 ADAM12O43184 909 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 FOSL2P15408 326 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 FGFR3P22607 806 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 LMO2P25791 158 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 PON1P27169 355 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 GTF2F1P35269 517 aaKnown RBP eCLIP9.95□□□□□ -0.82
ZNF548-206ENST00000597047 PSMC1P62191 440 aaKnown RBP9.95□□□□□ -0.82
ZNF548-206ENST00000597047 CAMK1Q14012 370 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 ADGRE1Q14246 886 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 PTPN14Q15678 1187 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 SLC39A12Q504Y0 691 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 TCEAL5Q5H9L2 206 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 KIAA0319Q5VV43 1072 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 ZNF280DQ6N043 979 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 ANKS3Q6ZW76 656 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 TOP6BLQ8N6T0 577 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 MRPL43Q8N983 215 aaKnown RBP9.95□□□□□ -0.82
ZNF548-206ENST00000597047 NEK11Q8NG66 645 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 CPLX3Q8WVH0 158 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 KAT5Q92993 513 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 MRPL38Q96DV4 380 aaKnown RBP9.95□□□□□ -0.82
ZNF548-206ENST00000597047 KLHL5Q96PQ7 755 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 ARID3AQ99856 593 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 MED10Q9BTT4 135 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 TRIM5Q9C035 493 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 LMAN2LQ9H0V9 348 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 NGRNQ9NPE2 291 aaKnown RBP9.95□□□□□ -0.82
ZNF548-206ENST00000597047 GDAP2Q9NXN4 497 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 FBXL5Q9UKA1 691 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 SSX2IPQ9Y2D8 614 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 VWA8A3KMH1 1905 aa9.95□□□□□ -0.82
ZNF548-206ENST00000597047 C2orf71A6NGG8 1288 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 TEX28O15482 410 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 CBFA2T2O43439 604 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 ATP2C2O75185 946 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 CALCAP01258 141 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 CNPP09543 421 aaKnown RBP9.94□□□□□ -0.82
ZNF548-206ENST00000597047 CD19P15391 556 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 TYMPP19971 482 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 PAX3P23760 479 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 ELF1P32519 619 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 SSTR3P32745 418 aaPredicted RBP9.94□□□□□ -0.82
ZNF548-206ENST00000597047 LHX1P48742 406 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 NDST1P52848 882 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 TSPY1Q01534 308 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 CYP27A1Q02318 531 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 DSG1Q02413 1049 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 KCNMA1Q12791 1236 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 CUL2Q13617 745 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 PHLDB3Q6NSJ2 640 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 PDXDC1Q6P996 788 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 TRIM65Q6PJ69 517 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 RSPO2Q6UXX9 243 aaPredicted RBP9.94□□□□□ -0.82
ZNF548-206ENST00000597047 CACNA2D4Q7Z3S7 1137 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 ACOT1Q86TX2 421 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 TMEM86AQ8N2M4 240 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 PIK3R5Q8WYR1 880 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 PPP2R3CQ969Q6 453 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 SYT15Q9BQS2 421 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 CLSTN3Q9BQT9 956 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 APOL5Q9BWW9 433 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 XPO4Q9C0E2 1151 aaKnown RBP9.94□□□□□ -0.82
ZNF548-206ENST00000597047 DPEP3Q9H4B8 488 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 NSUN3Q9H649 340 aaKnown RBP9.94□□□□□ -0.82
ZNF548-206ENST00000597047 NLRC4Q9NPP4 1024 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
ZNF548-206ENST00000597047 CHST7Q9NS84 486 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 STK39Q9UEW8 545 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 DNAJC12Q9UKB3 198 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 GTF3C4Q9UKN8 822 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 COQ4Q9Y3A0 265 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 MTCH2Q9Y6C9 303 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 CHD9Q3L8U1 2897 aa9.94□□□□□ -0.82
ZNF548-206ENST00000597047 FAM170AA1A519 330 aa9.93□□□□□ -0.82
ZNF548-206ENST00000597047 FSCN2O14926 492 aa9.93□□□□□ -0.82
ZNF548-206ENST00000597047 CLASP2O75122 1294 aaKnown RBP9.93□□□□□ -0.82
ZNF548-206ENST00000597047 STAU1O95793 577 aaKnown RBP9.93□□□□□ -0.82
ZNF548-206ENST00000597047 TPM3P06753 285 aa9.93□□□□□ -0.82
ZNF548-206ENST00000597047 ADH1AP07327 375 aa9.93□□□□□ -0.82
ZNF548-206ENST00000597047 TRIM21P19474 475 aaKnown RBP9.93□□□□□ -0.82
ZNF548-206ENST00000597047 WARSP23381 471 aaKnown RBP9.93□□□□□ -0.82
ZNF548-206ENST00000597047 TBXAS1P24557 533 aaPredicted RBP9.93□□□□□ -0.82
ZNF548-206ENST00000597047 ASPAP45381 313 aa9.93□□□□□ -0.82
ZNF548-206ENST00000597047 AARSP49588 968 aaKnown RBP eCLIP9.93□□□□□ -0.82
ZNF548-206ENST00000597047 NDUFV1P49821 464 aa9.93□□□□□ -0.82
ZNF548-206ENST00000597047 MFAP3P55082 362 aa9.93□□□□□ -0.82
ZNF548-206ENST00000597047 POLR2FP61218 127 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms