RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 RMND1Q9NWS8 449 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 IMPACTQ9P2X3 320 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 MTRRQ9UBK8 725 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 ASH1LQ9NR48 2969 aaKnown RBP13.96□□□□□ -0.17
SCAF1-202ENST00000595242 ARHGEF37A1IGU5 675 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 SLC38A8A6NNN8 435 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 C4orf47A7E2U8 309 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 ZNF197O14709 1029 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 CBFA2T2O43439 604 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 SLC37A4O43826 429 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 NPTXRO95502 500 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 TDP2O95551 362 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 CCR2P41597 374 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 QARSP47897 775 aaKnown RBP13.95□□□□□ -0.18
SCAF1-202ENST00000595242 SOX9P48436 509 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 PXNP49023 591 aaPredicted RBP13.95□□□□□ -0.18
SCAF1-202ENST00000595242 FANCCQ00597 558 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 EMC2Q15006 297 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 Q4G0T1 1027 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 RRAGBQ5VZM2 374 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 SLC27A1Q6PCB7 646 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 PDZD4Q76G19 769 aaPredicted RBP13.95□□□□□ -0.18
SCAF1-202ENST00000595242 CDR2LQ86X02 465 aaPredicted RBP13.95□□□□□ -0.18
SCAF1-202ENST00000595242 MFSD6LQ8IWD5 586 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 SPC24Q8NBT2 197 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 KIF12Q96FN5 646 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 MSANTD3Q96H12 275 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 MED15Q96RN5 788 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 MMTAG2Q9BU76 263 aaKnown RBP13.95□□□□□ -0.18
SCAF1-202ENST00000595242 EDEM2Q9BV94 578 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 RAB34Q9BZG1 259 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 STK17AQ9UEE5 414 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 PPME1Q9Y570 386 aa13.95□□□□□ -0.18
SCAF1-202ENST00000595242 NUP210Q8TEM1 1887 aaPredicted RBP13.95□□□□□ -0.18
SCAF1-202ENST00000595242 HELZ2Q9BYK8 2649 aaKnown RBP13.94□□□□□ -0.18
SCAF1-202ENST00000595242 ZNF638Q14966 1978 aaKnown RBP13.94□□□□□ -0.18
SCAF1-202ENST00000595242 BPTFQ12830 3046 aa13.94□□□□□ -0.18
SCAF1-202ENST00000595242 PP2D1A8MPX8 630 aa13.94□□□□□ -0.18
SCAF1-202ENST00000595242 PRRG1O14668 218 aa13.94□□□□□ -0.18
SCAF1-202ENST00000595242 B4GALT5O43286 388 aa13.94□□□□□ -0.18
SCAF1-202ENST00000595242 FGFR3P22607 806 aa13.94□□□□□ -0.18
SCAF1-202ENST00000595242 KPNA1P52294 538 aaPredicted RBP13.94□□□□□ -0.18
SCAF1-202ENST00000595242 MBTD1Q05BQ5 628 aa13.94□□□□□ -0.18
SCAF1-202ENST00000595242 MXD4Q14582 209 aaPredicted RBP13.94□□□□□ -0.18
SCAF1-202ENST00000595242 AMHR2Q16671 573 aa13.94□□□□□ -0.18
SCAF1-202ENST00000595242 CYP4A22Q5TCH4 519 aa13.94□□□□□ -0.18
SCAF1-202ENST00000595242 ZNF658Q5TYW1 1059 aaPredicted RBP13.94□□□□□ -0.18
SCAF1-202ENST00000595242 DAB2IPQ5VWQ8 1189 aa13.94□□□□□ -0.18
SCAF1-202ENST00000595242 TXNDC11Q6PKC3 985 aa13.94□□□□□ -0.18
SCAF1-202ENST00000595242 CCDC186Q7Z3E2 898 aa13.94□□□□□ -0.18
SCAF1-202ENST00000595242 ZNF461Q8TAF7 563 aa13.94□□□□□ -0.18
SCAF1-202ENST00000595242 ZC3H10Q96K80 434 aaKnown RBP13.94□□□□□ -0.18
SCAF1-202ENST00000595242 GTPBP4Q9BZE4 634 aaKnown RBP13.94□□□□□ -0.18
SCAF1-202ENST00000595242 TTC12Q9H892 705 aaPredicted RBP13.94□□□□□ -0.18
SCAF1-202ENST00000595242 KCNMB3Q9NPA1 279 aa13.94□□□□□ -0.18
SCAF1-202ENST00000595242 RTN4Q9NQC3 1192 aaKnown RBP13.94□□□□□ -0.18
SCAF1-202ENST00000595242 NCANO14594 1321 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 CCDC163A0A0D9SF12 145 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 A0A1B0GUA9 196 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 PPP1R3GB7ZBB8 358 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 EML1O00423 815 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 TBX3O15119 743 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 KLRC4O43908 158 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 EXTL3O43909 919 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 DKC1O60832 514 aaKnown RBP eCLIP13.93□□□□□ -0.18
SCAF1-202ENST00000595242 ZIC2O95409 532 aaPredicted RBP13.93□□□□□ -0.18
SCAF1-202ENST00000595242 RPN1P04843 607 aaKnown RBP13.93□□□□□ -0.18
SCAF1-202ENST00000595242 THP07101 528 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 CEACAM1P13688 526 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 PLCG1P19174 1290 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 CDC25AP30304 524 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 ELF1P32519 619 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 GSDMDP57764 484 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 TFDP1Q14186 410 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 HYIQ5T013 277 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 CNNM4Q6P4Q7 775 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 IFNLR1Q8IU57 520 aaPredicted RBP13.93□□□□□ -0.18
SCAF1-202ENST00000595242 YAF2Q8IY57 180 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 ZSCAN18Q8TBC5 510 aaPredicted RBP13.93□□□□□ -0.18
SCAF1-202ENST00000595242 KIAA1524Q8TCG1 905 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 LRRC15Q8TF66 581 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 HAS1Q92839 578 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 XPO4Q9C0E2 1151 aaKnown RBP13.93□□□□□ -0.18
SCAF1-202ENST00000595242 C8orf33Q9H7E9 229 aaPredicted RBP13.93□□□□□ -0.18
SCAF1-202ENST00000595242 TRPV4Q9HBA0 871 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 IFNKQ9P0W0 207 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 WRAP73Q9P2S5 460 aaPredicted RBP13.93□□□□□ -0.18
SCAF1-202ENST00000595242 DDX25Q9UHL0 483 aaKnown RBP13.93□□□□□ -0.18
SCAF1-202ENST00000595242 BACE2Q9Y5Z0 518 aa13.93□□□□□ -0.18
SCAF1-202ENST00000595242 HEPACAM2A8MVW5 462 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 SPECC1L-ADORA2AF8WAN1 911 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 PTGESO14684 152 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 ABLIM3O94929 683 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 RHOBTB3O94955 611 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 ATP1A3P13637 1013 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
SCAF1-202ENST00000595242 CASP1P29466 404 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 YWHABP31946 246 aaKnown RBP13.92□□□□□ -0.18
SCAF1-202ENST00000595242 CTHP32929 405 aa13.92□□□□□ -0.18
SCAF1-202ENST00000595242 ROR1Q01973 937 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms