RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 ASB16Q96NS5 453 aa25.32■■□□□ 1.64
LSM4-204ENST00000594828 DNAJC25Q9H1X3 360 aa25.32■■□□□ 1.64
LSM4-204ENST00000594828 PDE11AQ9HCR9 933 aa25.32■■□□□ 1.64
LSM4-204ENST00000594828 ASB3Q9Y575 518 aa25.32■■□□□ 1.64
LSM4-204ENST00000594828 EIF3DO15371 548 aaKnown RBP eCLIP25.31■■□□□ 1.64
LSM4-204ENST00000594828 FCARP24071 287 aa25.31■■□□□ 1.64
LSM4-204ENST00000594828 TUFMP49411 452 aaKnown RBP25.31■■□□□ 1.64
LSM4-204ENST00000594828 DNM1Q05193 864 aaKnown RBP25.31■■□□□ 1.64
LSM4-204ENST00000594828 TEAD2Q15562 447 aa25.31■■□□□ 1.64
LSM4-204ENST00000594828 CSGALNACT2Q8N6G5 542 aa25.31■■□□□ 1.64
LSM4-204ENST00000594828 TTC9BQ8N6N2 239 aa25.31■■□□□ 1.64
LSM4-204ENST00000594828 C1orf127Q8N9H9 656 aa25.31■■□□□ 1.64
LSM4-204ENST00000594828 SMARCD2Q92925 531 aa25.31■■□□□ 1.64
LSM4-204ENST00000594828 LRRC3Q9BY71 257 aa25.31■■□□□ 1.64
LSM4-204ENST00000594828 GPR88Q9GZN0 384 aa25.31■■□□□ 1.64
LSM4-204ENST00000594828 SOAT2O75908 522 aa25.3■■□□□ 1.64
LSM4-204ENST00000594828 DCNP07585 359 aaKnown RBP25.3■■□□□ 1.64
LSM4-204ENST00000594828 HOXD13P35453 343 aa25.3■■□□□ 1.64
LSM4-204ENST00000594828 SMARCB1Q12824 385 aa25.3■■□□□ 1.64
LSM4-204ENST00000594828 ANGPT1Q15389 498 aa25.3■■□□□ 1.64
LSM4-204ENST00000594828 FAM26FQ5R3K3 315 aa25.3■■□□□ 1.64
LSM4-204ENST00000594828 RESP18Q5W5W9 173 aa25.3■■□□□ 1.64
LSM4-204ENST00000594828 DNAJB7Q7Z6W7 309 aaPredicted RBP25.3■■□□□ 1.64
LSM4-204ENST00000594828 SHKBP1Q8TBC3 707 aa25.3■■□□□ 1.64
LSM4-204ENST00000594828 ZNF507Q8TCN5 953 aa25.3■■□□□ 1.64
LSM4-204ENST00000594828 FOXQ1Q9C009 403 aa25.3■■□□□ 1.64
LSM4-204ENST00000594828 RCOR1Q9UKL0 485 aa25.3■■□□□ 1.64
LSM4-204ENST00000594828 ITGA11Q9UKX5 1188 aa25.3■■□□□ 1.64
LSM4-204ENST00000594828 KANSL1LA0AUZ9 987 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 ZNF233A6NK53 670 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 KRT19P08727 400 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 CDR1P51861 262 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 MGAT5BQ3V5L5 792 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 UNC13DQ70J99 1090 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 EPM2AIP1Q7L775 607 aaPredicted RBP25.29■■□□□ 1.64
LSM4-204ENST00000594828 ITIH5Q86UX2 942 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 LRRTM3Q86VH5 581 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 TMC8Q8IU68 726 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 LRRC52Q8N7C0 313 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 PJA1Q8NG27 643 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 ZSCAN18Q8TBC5 510 aaPredicted RBP25.29■■□□□ 1.64
LSM4-204ENST00000594828 FAM200AQ8TCP9 573 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 C2orf15Q8WU43 125 aaKnown RBP25.29■■□□□ 1.64
LSM4-204ENST00000594828 PSMG2Q969U7 264 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 SEPT5Q99719 369 aaPredicted RBP25.29■■□□□ 1.64
LSM4-204ENST00000594828 DDX23Q9BUQ8 820 aaKnown RBP25.29■■□□□ 1.64
LSM4-204ENST00000594828 BLZF1Q9H2G9 400 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 SLITRK6Q9H5Y7 841 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 HSPBP1Q9NZL4 362 aa25.29■■□□□ 1.64
LSM4-204ENST00000594828 TSC2P49815 1807 aa25.28■■□□□ 1.64
LSM4-204ENST00000594828 A0A1W2PRU2 124 aa25.28■■□□□ 1.64
LSM4-204ENST00000594828 TMEM191BP0C7N4 346 aa25.28■■□□□ 1.64
LSM4-204ENST00000594828 CASP1P29466 404 aa25.28■■□□□ 1.64
LSM4-204ENST00000594828 NBL1P41271 181 aa25.28■■□□□ 1.64
LSM4-204ENST00000594828 RBP5P82980 135 aa25.28■■□□□ 1.64
LSM4-204ENST00000594828 GRM2Q14416 872 aa25.28■■□□□ 1.64
LSM4-204ENST00000594828 SURF1Q15526 300 aa25.28■■□□□ 1.64
LSM4-204ENST00000594828 DCP1BQ8IZD4 617 aaKnown RBP25.28■■□□□ 1.64
LSM4-204ENST00000594828 CXorf38Q8TB03 319 aa25.28■■□□□ 1.64
LSM4-204ENST00000594828 FAM84AQ96KN4 292 aa25.28■■□□□ 1.64
LSM4-204ENST00000594828 TRMT61BQ9BVS5 477 aaKnown RBP25.28■■□□□ 1.64
LSM4-204ENST00000594828 KIAA1586Q9HCI6 787 aa25.28■■□□□ 1.64
LSM4-204ENST00000594828 DLGAP2Q9P1A6 1054 aa25.28■■□□□ 1.64
LSM4-204ENST00000594828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.27■■□□□ 1.64
LSM4-204ENST00000594828 PROB1E7EW31 1015 aa25.27■■□□□ 1.64
LSM4-204ENST00000594828 HUS1O60921 280 aa25.27■■□□□ 1.64
LSM4-204ENST00000594828 AFMP43652 599 aa25.27■■□□□ 1.64
LSM4-204ENST00000594828 BFSP1Q12934 665 aa25.27■■□□□ 1.64
LSM4-204ENST00000594828 SCARA3Q6AZY7 606 aa25.27■■□□□ 1.64
LSM4-204ENST00000594828 CBWD2Q8IUF1 395 aa25.27■■□□□ 1.64
LSM4-204ENST00000594828 PDCL2Q8N4E4 241 aa25.27■■□□□ 1.64
LSM4-204ENST00000594828 SPPL2BQ8TCT7 592 aa25.27■■□□□ 1.64
LSM4-204ENST00000594828 ANKRD36BP1Q96IX9 119 aa25.27■■□□□ 1.64
LSM4-204ENST00000594828 MTMR12Q9C0I1 747 aa25.27■■□□□ 1.64
LSM4-204ENST00000594828 BRD9Q9H8M2 597 aa25.27■■□□□ 1.64
LSM4-204ENST00000594828 TRPV4Q9HBA0 871 aa25.27■■□□□ 1.64
LSM4-204ENST00000594828 INTS13Q9NVM9 706 aa25.27■■□□□ 1.64
LSM4-204ENST00000594828 R3HCC1Q9Y3T6 440 aaKnown RBP25.27■■□□□ 1.64
LSM4-204ENST00000594828 TCHHQ07283 1943 aa25.27■■□□□ 1.64
LSM4-204ENST00000594828 PIEZO1Q92508 2521 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 GFRA3O60609 400 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 FGF19O95750 216 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 PSMC3P17980 439 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 VIPR2P41587 438 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 TSPY1Q01534 308 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 EHHADHQ08426 723 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 UBXN2BQ14CS0 331 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 VEPH1Q14D04 833 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 LMBRD2Q68DH5 695 aaPredicted RBP25.26■■□□□ 1.63
LSM4-204ENST00000594828 VITQ6UXI7 678 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 CEP57L1Q8IYX8 460 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 SCFD1Q8WVM8 642 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 DNASE1L2Q92874 299 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 LPIN3Q9BQK8 851 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 ATXN3LQ9H3M9 355 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 ZNF334Q9HCZ1 680 aaPredicted RBP25.26■■□□□ 1.63
LSM4-204ENST00000594828 GDAP2Q9NXN4 497 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 ABI2Q9NYB9 513 aaPredicted RBP25.26■■□□□ 1.63
LSM4-204ENST00000594828 SIX4Q9UIU6 781 aa25.26■■□□□ 1.63
LSM4-204ENST00000594828 L1RE1Q9UN81 338 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms