RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 ERAP1Q9NZ08 941 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 COQ4Q9Y3A0 265 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 TRPM7Q96QT4 1865 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 PCNTO95613 3336 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 A0A0A6YYK5 440 aaPredicted RBP16.31■□□□□ 0.2
PNKP-204ENST00000594661 BHMG1C9JSJ3 638 aaPredicted RBP16.31■□□□□ 0.2
PNKP-204ENST00000594661 GAS2O43903 313 aaKnown RBP16.31■□□□□ 0.2
PNKP-204ENST00000594661 TNFAIP3P21580 790 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 MAPK4P31152 587 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 MTMR3Q13615 1198 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 CUL1Q13616 776 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 PTPROQ16827 1216 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 LMBRD2Q68DH5 695 aaPredicted RBP16.31■□□□□ 0.2
PNKP-204ENST00000594661 SESTD1Q86VW0 696 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 RNF149Q8NC42 400 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 ZNF516Q92618 1163 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 ZNF668Q96K58 619 aaPredicted RBP16.31■□□□□ 0.2
PNKP-204ENST00000594661 MSTO1Q9BUK6 570 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 RAB17Q9H0T7 212 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 ECT2Q9H8V3 914 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 SUCLA2Q9P2R7 463 aaPredicted RBP16.31■□□□□ 0.2
PNKP-204ENST00000594661 ADGRA2Q96PE1 1338 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 A0A0B4J269 797 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 A8MUI8 341 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 KCNK3O14649 394 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 MSCO60682 206 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 UBOX5O94941 541 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 ZNF286BP0CG31 522 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 GTF2H1P32780 548 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 GPC3P51654 580 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 ZNF157P51786 506 aaPredicted RBP16.3■□□□□ 0.2
PNKP-204ENST00000594661 CLCN3P51790 818 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 RNASE9P60153 205 aaKnown RBP16.3■□□□□ 0.2
PNKP-204ENST00000594661 MXD4Q14582 209 aaPredicted RBP16.3■□□□□ 0.2
PNKP-204ENST00000594661 KIF22Q14807 665 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 USP37Q86T82 979 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 RHPN2Q8IUC4 686 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 FBXL13Q8NEE6 735 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 PPTC7Q8NI37 304 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 KREMEN1Q96MU8 473 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 CCDC134Q9H6E4 229 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 KIAA1586Q9HCI6 787 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 ABCF3Q9NUQ8 709 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 DCDC2CA8MYV0 355 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 MYBL1P10243 752 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 IGBP1P78318 339 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 ENPEPQ07075 957 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 KLC1Q07866 573 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 PSMD6Q15008 389 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 TRADDQ15628 312 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 SEZ6Q53EL9 994 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 TRIM68Q6AZZ1 485 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 SLFN12LQ6IEE8 588 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 OR52E8Q6IFG1 317 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 CHADLQ6NUI6 762 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 ASRGL1Q7L266 308 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 PPM1KQ8N3J5 372 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 GBP7Q8N8V2 638 aaPredicted RBP16.3■□□□□ 0.2
PNKP-204ENST00000594661 EMID1Q96A84 441 aaPredicted RBP16.3■□□□□ 0.2
PNKP-204ENST00000594661 TINF2Q9BSI4 451 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 RAB20Q9NX57 234 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 SAMD15Q9P1V8 674 aa16.3■□□□□ 0.2
PNKP-204ENST00000594661 PTPRJQ12913 1337 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 FAM170AA1A519 330 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 KIAA0391O15091 583 aaKnown RBP16.29■□□□□ 0.2
PNKP-204ENST00000594661 C22orf31O95567 290 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 HARSP12081 509 aaKnown RBP16.29■□□□□ 0.2
PNKP-204ENST00000594661 ACADSP16219 412 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 SMPD1P17405 629 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 ABCB4P21439 1286 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 EFNA5P52803 228 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 BNIP1Q12981 228 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 DBN1Q16643 649 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 EFCAB12Q6NXP0 572 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 C15orf39Q6ZRI6 1047 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 PEX26Q7Z412 305 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 TRIM42Q8IWZ5 723 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 EXOC8Q8IYI6 725 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 METTL13Q8N6R0 699 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 HELQQ8TDG4 1101 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 ATXN2LQ8WWM7 1075 aaKnown RBP16.29■□□□□ 0.2
PNKP-204ENST00000594661 CTNNBL1Q8WYA6 563 aaPredicted RBP16.29■□□□□ 0.2
PNKP-204ENST00000594661 PBKQ96KB5 322 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 DMAP1Q9NPF5 467 aaPredicted RBP16.29■□□□□ 0.2
PNKP-204ENST00000594661 ATXN10Q9UBB4 475 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 ZNF236Q9UL36 1845 aa16.29■□□□□ 0.2
PNKP-204ENST00000594661 SLC15A5A6NIM6 579 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 EIF4E1BA6NMX2 242 aaKnown RBP16.28■□□□□ 0.2
PNKP-204ENST00000594661 ADCY6O43306 1168 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 OAS1P00973 400 aaKnown RBP16.28■□□□□ 0.2
PNKP-204ENST00000594661 TMEM253P0C7T8 217 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 INSRRP14616 1297 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 SCNN1BP51168 640 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 COPS2P61201 443 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 CLDN10P78369 228 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 TMEM154Q6P9G4 183 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 DAAM2Q86T65 1068 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 SYCE1Q8N0S2 351 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 SLC20A1Q8WUM9 679 aa16.28■□□□□ 0.2
PNKP-204ENST00000594661 VTI1AQ96AJ9 217 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms