RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 MOCS3O95396 460 aa22.15■■□□□ 1.14
PNKP-203ENST00000593946 CLTBP09497 229 aa22.15■■□□□ 1.14
PNKP-203ENST00000593946 CASQ1P31415 396 aa22.15■■□□□ 1.14
PNKP-203ENST00000593946 CLCNKBP51801 687 aa22.15■■□□□ 1.14
PNKP-203ENST00000593946 NDST1P52848 882 aa22.15■■□□□ 1.14
PNKP-203ENST00000593946 CLLU1OSQ5K130 101 aa22.15■■□□□ 1.14
PNKP-203ENST00000593946 ACAD10Q6JQN1 1059 aa22.15■■□□□ 1.14
PNKP-203ENST00000593946 GLB1LQ6UWU2 654 aa22.15■■□□□ 1.14
PNKP-203ENST00000593946 TRIM58Q8NG06 486 aa22.15■■□□□ 1.14
PNKP-203ENST00000593946 CTNNBL1Q8WYA6 563 aaPredicted RBP22.15■■□□□ 1.14
PNKP-203ENST00000593946 PCDHGC3Q9UN70 934 aa22.15■■□□□ 1.14
PNKP-203ENST00000593946 INPP5FQ9Y2H2 1132 aa22.15■■□□□ 1.14
PNKP-203ENST00000593946 PODXLO00592 558 aa22.14■■□□□ 1.14
PNKP-203ENST00000593946 TACC1O75410 805 aa22.14■■□□□ 1.14
PNKP-203ENST00000593946 ABCB4P21439 1286 aa22.14■■□□□ 1.14
PNKP-203ENST00000593946 NOMO3P69849 1222 aa22.14■■□□□ 1.14
PNKP-203ENST00000593946 CENPCQ03188 943 aa22.14■■□□□ 1.14
PNKP-203ENST00000593946 UPP1Q16831 310 aa22.14■■□□□ 1.14
PNKP-203ENST00000593946 NECAB2Q7Z6G3 386 aa22.14■■□□□ 1.14
PNKP-203ENST00000593946 CYFIP2Q96F07 1278 aa22.14■■□□□ 1.14
PNKP-203ENST00000593946 NOX5Q96PH1 765 aa22.14■■□□□ 1.14
PNKP-203ENST00000593946 THAP2Q9H0W7 228 aa22.14■■□□□ 1.14
PNKP-203ENST00000593946 PDCL3Q9H2J4 239 aa22.14■■□□□ 1.14
PNKP-203ENST00000593946 TMEM39AQ9NV64 488 aa22.14■■□□□ 1.14
PNKP-203ENST00000593946 TSC2P49815 1807 aa22.14■■□□□ 1.13
PNKP-203ENST00000593946 CASTOR2A6NHX0 329 aa22.14■■□□□ 1.13
PNKP-203ENST00000593946 BUB1O43683 1085 aa22.14■■□□□ 1.13
PNKP-203ENST00000593946 ORC1Q13415 861 aa22.14■■□□□ 1.13
PNKP-203ENST00000593946 TUSC3Q13454 348 aa22.14■■□□□ 1.13
PNKP-203ENST00000593946 KBTBD7Q8WVZ9 684 aa22.14■■□□□ 1.13
PNKP-203ENST00000593946 RFFLQ8WZ73 363 aa22.14■■□□□ 1.13
PNKP-203ENST00000593946 NT5C1AQ9BXI3 368 aa22.14■■□□□ 1.13
PNKP-203ENST00000593946 FNDC1Q4ZHG4 1894 aaPredicted RBP22.13■■□□□ 1.13
PNKP-203ENST00000593946 LTBP2Q14767 1821 aa22.13■■□□□ 1.13
PNKP-203ENST00000593946 FAM170AA1A519 330 aa22.13■■□□□ 1.13
PNKP-203ENST00000593946 CD19P15391 556 aa22.13■■□□□ 1.13
PNKP-203ENST00000593946 IGFBP6P24592 240 aaPredicted RBP22.13■■□□□ 1.13
PNKP-203ENST00000593946 NAA35Q5VZE5 725 aa22.13■■□□□ 1.13
PNKP-203ENST00000593946 DPH6Q7L8W6 267 aa22.13■■□□□ 1.13
PNKP-203ENST00000593946 UNC93AQ86WB7 457 aa22.13■■□□□ 1.13
PNKP-203ENST00000593946 PASD1Q8IV76 773 aa22.13■■□□□ 1.13
PNKP-203ENST00000593946 TOP6BLQ8N6T0 577 aa22.13■■□□□ 1.13
PNKP-203ENST00000593946 C3orf58Q8NDZ4 430 aa22.13■■□□□ 1.13
PNKP-203ENST00000593946 APPL2Q8NEU8 664 aa22.13■■□□□ 1.13
PNKP-203ENST00000593946 ARHGEF26Q96DR7 871 aa22.13■■□□□ 1.13
PNKP-203ENST00000593946 DDX27Q96GQ7 796 aaKnown RBP22.13■■□□□ 1.13
PNKP-203ENST00000593946 PAAF1Q9BRP4 392 aa22.13■■□□□ 1.13
PNKP-203ENST00000593946 L1RE1Q9UN81 338 aa22.13■■□□□ 1.13
PNKP-203ENST00000593946 NME7Q9Y5B8 376 aa22.13■■□□□ 1.13
PNKP-203ENST00000593946 MED7O43513 233 aa22.12■■□□□ 1.13
PNKP-203ENST00000593946 LSM8O95777 96 aaKnown RBP22.12■■□□□ 1.13
PNKP-203ENST00000593946 FGFR1P11362 822 aa22.12■■□□□ 1.13
PNKP-203ENST00000593946 SSTR3P32745 418 aaPredicted RBP22.12■■□□□ 1.13
PNKP-203ENST00000593946 NOMO2Q5JPE7 1267 aa22.12■■□□□ 1.13
PNKP-203ENST00000593946 CPA5Q8WXQ8 436 aa22.12■■□□□ 1.13
PNKP-203ENST00000593946 UROC1Q96N76 676 aa22.12■■□□□ 1.13
PNKP-203ENST00000593946 ALS2CR12Q96Q35 445 aa22.12■■□□□ 1.13
PNKP-203ENST00000593946 PRDM10Q9NQV6 1147 aa22.12■■□□□ 1.13
PNKP-203ENST00000593946 PCDHGC5Q9Y5F6 944 aa22.12■■□□□ 1.13
PNKP-203ENST00000593946 CTAGE9A4FU28 777 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 HUS1O60921 280 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 VDRP11473 427 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 CDH5P33151 784 aaPredicted RBP22.11■■□□□ 1.13
PNKP-203ENST00000593946 AARSP49588 968 aaKnown RBP eCLIP22.11■■□□□ 1.13
PNKP-203ENST00000593946 GPC5P78333 572 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 TCEAL1Q15170 157 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 PPP1R2P3Q6NXS1 205 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 CRIPAKQ8N1N5 446 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 NAPGQ99747 312 aaPredicted RBP22.11■■□□□ 1.13
PNKP-203ENST00000593946 MCOLN1Q9GZU1 580 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 KIAA1257Q9ULG3 409 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.11■■□□□ 1.13
PNKP-203ENST00000593946 FAM163BP0C2L3 166 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 NSFP46459 744 aaKnown RBP22.11■■□□□ 1.13
PNKP-203ENST00000593946 NAP1L1P55209 391 aaKnown RBP22.11■■□□□ 1.13
PNKP-203ENST00000593946 MON1BQ7L1V2 547 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 DEFB128Q7Z7B8 93 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 MCOLN2Q8IZK6 566 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 PDCL2Q8N4E4 241 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 SLC35G2Q8TBE7 412 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 URGCPQ8TCY9 931 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 VWCEQ96DN2 955 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 HEXIM2Q96MH2 286 aaKnown RBP22.11■■□□□ 1.13
PNKP-203ENST00000593946 ZNF518BQ9C0D4 1074 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 KANSL3Q9P2N6 904 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 GTF3C4Q9UKN8 822 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 PCDHB7Q9Y5E2 793 aa22.11■■□□□ 1.13
PNKP-203ENST00000593946 ALPK3Q96L96 1907 aa22.1■■□□□ 1.13
PNKP-203ENST00000593946 CYB561D2O14569 222 aa22.1■■□□□ 1.13
PNKP-203ENST00000593946 WARSP23381 471 aaKnown RBP22.1■■□□□ 1.13
PNKP-203ENST00000593946 RFC2P35250 354 aa22.1■■□□□ 1.13
PNKP-203ENST00000593946 DSC1Q08554 894 aa22.1■■□□□ 1.13
PNKP-203ENST00000593946 IFI16Q16666 785 aaKnown RBP22.1■■□□□ 1.13
PNKP-203ENST00000593946 SGO2Q562F6 1265 aa22.1■■□□□ 1.13
PNKP-203ENST00000593946 PHF13Q86YI8 300 aaPredicted RBP22.1■■□□□ 1.13
PNKP-203ENST00000593946 RHOT2Q8IXI1 618 aa22.1■■□□□ 1.13
PNKP-203ENST00000593946 ADGRF2Q8IZF7 708 aa22.1■■□□□ 1.13
PNKP-203ENST00000593946 OR6B3Q8NGW1 331 aa22.1■■□□□ 1.13
PNKP-203ENST00000593946 RABGGTAQ92696 567 aa22.1■■□□□ 1.13
PNKP-203ENST00000593946 SENP8Q96LD8 212 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms