RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 FAM13AO94988 1023 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 ADSSP30520 456 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 CYP4F8P98187 520 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 KCNA1Q09470 495 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 SRSF5Q13243 272 aaKnown RBP11.56□□□□□ -0.56
USE1-203ENST00000593597 PUM1Q14671 1186 aaKnown RBP eCLIP11.56□□□□□ -0.56
USE1-203ENST00000593597 LPAL2Q16609 132 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 CCDC142Q17RM4 750 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 MAMSTRQ6ZN01 415 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 DNAJB7Q7Z6W7 309 aaPredicted RBP11.56□□□□□ -0.56
USE1-203ENST00000593597 TMEM150AQ86TG1 271 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 ARID3BQ8IVW6 561 aaPredicted RBP11.56□□□□□ -0.56
USE1-203ENST00000593597 TTC8Q8TAM2 541 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 FAM212AQ96EL1 285 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 EPSTI1Q96J88 318 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 AK8Q96MA6 479 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 STRA6Q9BX79 667 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 FGFBP2Q9BYJ0 223 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 ZCWPW1Q9H0M4 648 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 SMG9Q9H0W8 520 aaKnown RBP11.56□□□□□ -0.56
USE1-203ENST00000593597 SLITRK6Q9H5Y7 841 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 PARVGQ9HBI0 331 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 TMLHEQ9NVH6 421 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 NCDNQ9UBB6 729 aa11.56□□□□□ -0.56
USE1-203ENST00000593597 MRPS17Q9Y2R5 130 aaKnown RBP11.56□□□□□ -0.56
USE1-203ENST00000593597 H0YCG3 227 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 H3BQV1 296 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 CHADO15335 359 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 NCAM2O15394 837 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 SLC26A4O43511 780 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 ODC1P11926 461 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 GABRR2P28476 465 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 EPHB3P54753 998 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 TNK2Q07912 1038 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 TMEM132DQ14C87 1099 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 PTPAQ15257 358 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 SF3A1Q15459 793 aaKnown RBP11.55□□□□□ -0.56
USE1-203ENST00000593597 SLC39A12Q504Y0 691 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 PKN3Q6P5Z2 889 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 SFR1Q86XK3 245 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 CXorf38Q8TB03 319 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 ATRIPQ8WXE1 791 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 LARP4BQ92615 738 aaKnown RBP11.55□□□□□ -0.56
USE1-203ENST00000593597 OXCT2Q9BYC2 517 aaPredicted RBP11.55□□□□□ -0.56
USE1-203ENST00000593597 ST6GALNAC4Q9H4F1 302 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 GTSE1Q9NYZ3 720 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 ACACBO00763 2458 aa11.55□□□□□ -0.56
USE1-203ENST00000593597 TPRP12270 2363 aaKnown RBP11.55□□□□□ -0.56
USE1-203ENST00000593597 MYBPHLA2RUH7 354 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 OTOL1A6NHN0 477 aaPredicted RBP11.54□□□□□ -0.56
USE1-203ENST00000593597 SPECC1L-ADORA2AF8WAN1 911 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 HRO43593 1189 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 TADA3O75528 432 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 CTHP32929 405 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 LONP1P36776 959 aaKnown RBP11.54□□□□□ -0.56
USE1-203ENST00000593597 UBA7P41226 1012 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 GPR15P49685 360 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 CASP5P51878 434 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 MLLT6P55198 1093 aaPredicted RBP11.54□□□□□ -0.56
USE1-203ENST00000593597 PLD1Q13393 1074 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 KYAT1Q16773 422 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 GPR158Q5T848 1215 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 WSCD1Q658N2 575 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 USP37Q86T82 979 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 GIPC2Q8TF65 315 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 DNAJC19Q96DA6 116 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 CALML4Q96GE6 196 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 SEPT5Q99719 369 aaPredicted RBP11.54□□□□□ -0.56
USE1-203ENST00000593597 CCSER1Q9C0I3 900 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 GPR88Q9GZN0 384 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 ATXN3LQ9H3M9 355 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 ZHX3Q9H4I2 956 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 KCNG1Q9UIX4 513 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 FBXO2Q9UK22 296 aaPredicted RBP11.54□□□□□ -0.56
USE1-203ENST00000593597 DERAQ9Y315 318 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 KIF3AQ9Y496 699 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 CLIC4Q9Y696 253 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 MAP1BP46821 2468 aaKnown RBP11.54□□□□□ -0.56
USE1-203ENST00000593597 USP24Q9UPU5 2620 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 SDK1Q7Z5N4 2213 aa11.54□□□□□ -0.56
USE1-203ENST00000593597 A0A087X0B3 334 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 MYMKA6NI61 221 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 CHURC1-FNTBB4DL54 471 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 CYB561D2O14569 222 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 XPOTO43592 962 aaKnown RBP11.53□□□□□ -0.56
USE1-203ENST00000593597 HCRTO43612 131 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 PAPSS2O95340 614 aaPredicted RBP11.53□□□□□ -0.56
USE1-203ENST00000593597 HAPLN1P10915 354 aaPredicted RBP11.53□□□□□ -0.56
USE1-203ENST00000593597 HMGA1P17096 107 aaKnown RBP11.53□□□□□ -0.56
USE1-203ENST00000593597 ALDH1A3P47895 512 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 FNTBP49356 437 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 CCR3P51677 355 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 ATXN1P54253 815 aaKnown RBP11.53□□□□□ -0.56
USE1-203ENST00000593597 CCINQ13939 588 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 PON2Q15165 354 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 LARP1BQ659C4 914 aaKnown RBP11.53□□□□□ -0.56
USE1-203ENST00000593597 NAIF1Q69YI7 327 aaPredicted RBP11.53□□□□□ -0.56
USE1-203ENST00000593597 ADALQ6DHV7 355 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 FAM173BQ6P4H8 233 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 DYMQ7RTS9 669 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms